Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25111 | 75556;75557;75558 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
N2AB | 23470 | 70633;70634;70635 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
N2A | 22543 | 67852;67853;67854 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
N2B | 16046 | 48361;48362;48363 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
Novex-1 | 16171 | 48736;48737;48738 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
Novex-2 | 16238 | 48937;48938;48939 | chr2:178570801;178570800;178570799 | chr2:179435528;179435527;179435526 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs879132850 | None | 0.892 | N | 0.616 | 0.607 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs879132850 | None | 0.892 | N | 0.616 | 0.607 | None | gnomAD-4.0.0 | 2.56315E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8488 | likely_pathogenic | 0.8504 | pathogenic | -1.802 | Destabilizing | 0.845 | D | 0.615 | neutral | None | None | None | None | I |
I/C | 0.8632 | likely_pathogenic | 0.8657 | pathogenic | -1.056 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
I/D | 0.9942 | likely_pathogenic | 0.9943 | pathogenic | -1.341 | Destabilizing | 0.996 | D | 0.664 | neutral | None | None | None | None | I |
I/E | 0.9881 | likely_pathogenic | 0.9884 | pathogenic | -1.246 | Destabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | I |
I/F | 0.3321 | likely_benign | 0.3322 | benign | -1.066 | Destabilizing | 0.975 | D | 0.656 | neutral | None | None | None | None | I |
I/G | 0.9697 | likely_pathogenic | 0.9686 | pathogenic | -2.225 | Highly Destabilizing | 0.987 | D | 0.667 | neutral | None | None | None | None | I |
I/H | 0.9728 | likely_pathogenic | 0.9742 | pathogenic | -1.564 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/K | 0.9746 | likely_pathogenic | 0.9769 | pathogenic | -1.246 | Destabilizing | 0.983 | D | 0.661 | neutral | N | 0.520190816 | None | None | I |
I/L | 0.1822 | likely_benign | 0.1774 | benign | -0.663 | Destabilizing | 0.426 | N | 0.504 | neutral | N | 0.492661904 | None | None | I |
I/M | 0.236 | likely_benign | 0.2255 | benign | -0.553 | Destabilizing | 0.983 | D | 0.659 | neutral | N | 0.496806642 | None | None | I |
I/N | 0.9358 | likely_pathogenic | 0.9366 | pathogenic | -1.207 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/P | 0.977 | likely_pathogenic | 0.9747 | pathogenic | -1.014 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | I |
I/Q | 0.976 | likely_pathogenic | 0.9773 | pathogenic | -1.24 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | I |
I/R | 0.9619 | likely_pathogenic | 0.9654 | pathogenic | -0.845 | Destabilizing | 0.983 | D | 0.683 | prob.neutral | N | 0.520190816 | None | None | I |
I/S | 0.9197 | likely_pathogenic | 0.916 | pathogenic | -1.884 | Destabilizing | 0.987 | D | 0.614 | neutral | None | None | None | None | I |
I/T | 0.8987 | likely_pathogenic | 0.8974 | pathogenic | -1.659 | Destabilizing | 0.892 | D | 0.616 | neutral | N | 0.519430348 | None | None | I |
I/V | 0.119 | likely_benign | 0.1151 | benign | -1.014 | Destabilizing | 0.011 | N | 0.316 | neutral | D | 0.525922928 | None | None | I |
I/W | 0.9591 | likely_pathogenic | 0.9571 | pathogenic | -1.286 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
I/Y | 0.8221 | likely_pathogenic | 0.83 | pathogenic | -1.001 | Destabilizing | 0.987 | D | 0.636 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.