Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25112 | 75559;75560;75561 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
N2AB | 23471 | 70636;70637;70638 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
N2A | 22544 | 67855;67856;67857 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
N2B | 16047 | 48364;48365;48366 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
Novex-1 | 16172 | 48739;48740;48741 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
Novex-2 | 16239 | 48940;48941;48942 | chr2:178570798;178570797;178570796 | chr2:179435525;179435524;179435523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs984744354 | -0.424 | 0.024 | N | 0.365 | 0.044 | 0.15556083564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/T | rs984744354 | -0.424 | 0.024 | N | 0.365 | 0.044 | 0.15556083564 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1016 | likely_benign | 0.1037 | benign | -0.553 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | N |
S/C | 0.1322 | likely_benign | 0.1341 | benign | -0.401 | Destabilizing | 0.828 | D | 0.361 | neutral | D | 0.524146485 | None | None | N |
S/D | 0.4736 | ambiguous | 0.4143 | ambiguous | 0.288 | Stabilizing | None | N | 0.122 | neutral | None | None | None | None | N |
S/E | 0.5352 | ambiguous | 0.4846 | ambiguous | 0.265 | Stabilizing | None | N | 0.148 | neutral | None | None | None | None | N |
S/F | 0.2647 | likely_benign | 0.2826 | benign | -0.929 | Destabilizing | 0.356 | N | 0.419 | neutral | None | None | None | None | N |
S/G | 0.1566 | likely_benign | 0.1424 | benign | -0.75 | Destabilizing | 0.024 | N | 0.342 | neutral | D | 0.52362641 | None | None | N |
S/H | 0.3599 | ambiguous | 0.327 | benign | -1.063 | Destabilizing | 0.356 | N | 0.353 | neutral | None | None | None | None | N |
S/I | 0.2036 | likely_benign | 0.1888 | benign | -0.149 | Destabilizing | 0.295 | N | 0.417 | neutral | N | 0.505387366 | None | None | N |
S/K | 0.6652 | likely_pathogenic | 0.6191 | pathogenic | -0.413 | Destabilizing | 0.016 | N | 0.325 | neutral | None | None | None | None | N |
S/L | 0.1312 | likely_benign | 0.1397 | benign | -0.149 | Destabilizing | 0.072 | N | 0.353 | neutral | None | None | None | None | N |
S/M | 0.2277 | likely_benign | 0.222 | benign | -0.149 | Destabilizing | 0.628 | D | 0.359 | neutral | None | None | None | None | N |
S/N | 0.2148 | likely_benign | 0.191 | benign | -0.33 | Destabilizing | 0.055 | N | 0.357 | neutral | D | 0.522066185 | None | None | N |
S/P | 0.8425 | likely_pathogenic | 0.8551 | pathogenic | -0.252 | Destabilizing | 0.136 | N | 0.376 | neutral | None | None | None | None | N |
S/Q | 0.5091 | ambiguous | 0.4527 | ambiguous | -0.427 | Destabilizing | 0.038 | N | 0.326 | neutral | None | None | None | None | N |
S/R | 0.5659 | likely_pathogenic | 0.5181 | ambiguous | -0.276 | Destabilizing | None | N | 0.371 | neutral | N | 0.485761456 | None | None | N |
S/T | 0.1019 | likely_benign | 0.101 | benign | -0.387 | Destabilizing | 0.024 | N | 0.365 | neutral | N | 0.473850951 | None | None | N |
S/V | 0.2128 | likely_benign | 0.2109 | benign | -0.252 | Destabilizing | 0.072 | N | 0.341 | neutral | None | None | None | None | N |
S/W | 0.3942 | ambiguous | 0.4094 | ambiguous | -0.951 | Destabilizing | 0.864 | D | 0.496 | neutral | None | None | None | None | N |
S/Y | 0.229 | likely_benign | 0.236 | benign | -0.649 | Destabilizing | 0.356 | N | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.