Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25114 | 75565;75566;75567 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
N2AB | 23473 | 70642;70643;70644 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
N2A | 22546 | 67861;67862;67863 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
N2B | 16049 | 48370;48371;48372 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
Novex-1 | 16174 | 48745;48746;48747 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
Novex-2 | 16241 | 48946;48947;48948 | chr2:178570792;178570791;178570790 | chr2:179435519;179435518;179435517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs373701934 | -0.703 | 1.0 | D | 0.721 | 0.41 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/H | rs373701934 | -0.703 | 1.0 | D | 0.721 | 0.41 | None | gnomAD-4.0.0 | 2.03007E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40996E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3369 | likely_benign | 0.341 | ambiguous | -0.369 | Destabilizing | 0.996 | D | 0.59 | neutral | N | 0.507977775 | None | None | I |
D/C | 0.8265 | likely_pathogenic | 0.8429 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
D/E | 0.4032 | ambiguous | 0.4119 | ambiguous | -0.439 | Destabilizing | 0.767 | D | 0.219 | neutral | N | 0.488770656 | None | None | I |
D/F | 0.8056 | likely_pathogenic | 0.8096 | pathogenic | -0.02 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
D/G | 0.5313 | ambiguous | 0.5336 | ambiguous | -0.622 | Destabilizing | 0.998 | D | 0.596 | neutral | D | 0.531450854 | None | None | I |
D/H | 0.5047 | ambiguous | 0.5129 | ambiguous | 0.208 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.532211323 | None | None | I |
D/I | 0.616 | likely_pathogenic | 0.638 | pathogenic | 0.269 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
D/K | 0.7834 | likely_pathogenic | 0.7903 | pathogenic | -0.04 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
D/L | 0.5369 | ambiguous | 0.5409 | ambiguous | 0.269 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
D/M | 0.8314 | likely_pathogenic | 0.8317 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
D/N | 0.2217 | likely_benign | 0.2264 | benign | -0.485 | Destabilizing | 0.999 | D | 0.671 | neutral | N | 0.500633941 | None | None | I |
D/P | 0.699 | likely_pathogenic | 0.7248 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
D/Q | 0.7274 | likely_pathogenic | 0.7179 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
D/R | 0.831 | likely_pathogenic | 0.8278 | pathogenic | 0.319 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
D/S | 0.3032 | likely_benign | 0.3074 | benign | -0.613 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | I |
D/T | 0.6262 | likely_pathogenic | 0.634 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
D/V | 0.4238 | ambiguous | 0.4351 | ambiguous | 0.079 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | D | 0.531450854 | None | None | I |
D/W | 0.9586 | likely_pathogenic | 0.9585 | pathogenic | 0.172 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/Y | 0.3373 | likely_benign | 0.3523 | ambiguous | 0.223 | Stabilizing | 1.0 | D | 0.762 | deleterious | D | 0.532464812 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.