Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25117 | 75574;75575;75576 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
N2AB | 23476 | 70651;70652;70653 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
N2A | 22549 | 67870;67871;67872 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
N2B | 16052 | 48379;48380;48381 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
Novex-1 | 16177 | 48754;48755;48756 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
Novex-2 | 16244 | 48955;48956;48957 | chr2:178570783;178570782;178570781 | chr2:179435510;179435509;179435508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1559394408 | None | 0.005 | N | 0.554 | 0.189 | 0.204665344411 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8047 | likely_pathogenic | 0.8387 | pathogenic | -2.615 | Highly Destabilizing | 0.157 | N | 0.631 | neutral | None | None | None | None | N |
Y/C | 0.2961 | likely_benign | 0.3104 | benign | -1.1 | Destabilizing | 0.005 | N | 0.554 | neutral | N | 0.481952892 | None | None | N |
Y/D | 0.721 | likely_pathogenic | 0.7657 | pathogenic | -2.109 | Highly Destabilizing | 0.859 | D | 0.747 | deleterious | N | 0.499803658 | None | None | N |
Y/E | 0.9029 | likely_pathogenic | 0.9287 | pathogenic | -2.014 | Highly Destabilizing | 0.726 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/F | 0.1168 | likely_benign | 0.1192 | benign | -1.125 | Destabilizing | 0.001 | N | 0.29 | neutral | N | 0.464674107 | None | None | N |
Y/G | 0.7297 | likely_pathogenic | 0.7721 | pathogenic | -2.955 | Highly Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
Y/H | 0.4338 | ambiguous | 0.4812 | ambiguous | -1.582 | Destabilizing | 0.859 | D | 0.683 | prob.neutral | N | 0.488282768 | None | None | N |
Y/I | 0.6329 | likely_pathogenic | 0.684 | pathogenic | -1.548 | Destabilizing | 0.396 | N | 0.694 | prob.neutral | None | None | None | None | N |
Y/K | 0.8849 | likely_pathogenic | 0.9109 | pathogenic | -1.606 | Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
Y/L | 0.5295 | ambiguous | 0.5586 | ambiguous | -1.548 | Destabilizing | 0.157 | N | 0.606 | neutral | None | None | None | None | N |
Y/M | 0.7124 | likely_pathogenic | 0.7462 | pathogenic | -1.065 | Destabilizing | 0.909 | D | 0.714 | prob.delet. | None | None | None | None | N |
Y/N | 0.4561 | ambiguous | 0.515 | ambiguous | -1.965 | Destabilizing | 0.859 | D | 0.719 | prob.delet. | N | 0.479417997 | None | None | N |
Y/P | 0.967 | likely_pathogenic | 0.9741 | pathogenic | -1.905 | Destabilizing | 0.89 | D | 0.757 | deleterious | None | None | None | None | N |
Y/Q | 0.8114 | likely_pathogenic | 0.8482 | pathogenic | -1.896 | Destabilizing | 0.89 | D | 0.727 | prob.delet. | None | None | None | None | N |
Y/R | 0.8042 | likely_pathogenic | 0.8439 | pathogenic | -1.164 | Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
Y/S | 0.6251 | likely_pathogenic | 0.6824 | pathogenic | -2.332 | Highly Destabilizing | 0.497 | N | 0.682 | prob.neutral | N | 0.475152036 | None | None | N |
Y/T | 0.8024 | likely_pathogenic | 0.8383 | pathogenic | -2.142 | Highly Destabilizing | 0.567 | D | 0.686 | prob.neutral | None | None | None | None | N |
Y/V | 0.5725 | likely_pathogenic | 0.6115 | pathogenic | -1.905 | Destabilizing | 0.157 | N | 0.647 | neutral | None | None | None | None | N |
Y/W | 0.5397 | ambiguous | 0.5661 | pathogenic | -0.771 | Destabilizing | 0.909 | D | 0.676 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.