Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25118 | 75577;75578;75579 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
N2AB | 23477 | 70654;70655;70656 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
N2A | 22550 | 67873;67874;67875 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
N2B | 16053 | 48382;48383;48384 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
Novex-1 | 16178 | 48757;48758;48759 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
Novex-2 | 16245 | 48958;48959;48960 | chr2:178570780;178570779;178570778 | chr2:179435507;179435506;179435505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1160362939 | 0.21 | 0.062 | N | 0.566 | 0.086 | 0.29527378943 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs1160362939 | 0.21 | 0.062 | N | 0.566 | 0.086 | 0.29527378943 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
K/N | rs780754941 | -0.002 | 0.117 | N | 0.541 | 0.052 | 0.176091768786 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63399E-04 | None | 0 | 0 | 1.65673E-04 |
K/N | rs780754941 | -0.002 | 0.117 | N | 0.541 | 0.052 | 0.176091768786 | gnomAD-4.0.0 | 1.36859E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 2.08691E-04 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3719 | ambiguous | 0.3728 | ambiguous | 0.057 | Stabilizing | 0.035 | N | 0.553 | neutral | None | None | None | None | N |
K/C | 0.708 | likely_pathogenic | 0.7105 | pathogenic | -0.286 | Destabilizing | 0.935 | D | 0.578 | neutral | None | None | None | None | N |
K/D | 0.6957 | likely_pathogenic | 0.6971 | pathogenic | -0.103 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | N |
K/E | 0.2173 | likely_benign | 0.2212 | benign | -0.099 | Destabilizing | 0.062 | N | 0.566 | neutral | N | 0.506734161 | None | None | N |
K/F | 0.815 | likely_pathogenic | 0.8246 | pathogenic | -0.169 | Destabilizing | 0.555 | D | 0.583 | neutral | None | None | None | None | N |
K/G | 0.4351 | ambiguous | 0.4354 | ambiguous | -0.126 | Destabilizing | 0.149 | N | 0.552 | neutral | None | None | None | None | N |
K/H | 0.3654 | ambiguous | 0.3596 | ambiguous | -0.307 | Destabilizing | 0.555 | D | 0.584 | neutral | None | None | None | None | N |
K/I | 0.4265 | ambiguous | 0.4299 | ambiguous | 0.458 | Stabilizing | 0.484 | N | 0.582 | neutral | N | 0.508121027 | None | None | N |
K/L | 0.4133 | ambiguous | 0.4187 | ambiguous | 0.458 | Stabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
K/M | 0.2793 | likely_benign | 0.2848 | benign | 0.136 | Stabilizing | 0.791 | D | 0.576 | neutral | None | None | None | None | N |
K/N | 0.5558 | ambiguous | 0.5531 | ambiguous | 0.117 | Stabilizing | 0.117 | N | 0.541 | neutral | N | 0.511006617 | None | None | N |
K/P | 0.8206 | likely_pathogenic | 0.8236 | pathogenic | 0.351 | Stabilizing | 0.555 | D | 0.583 | neutral | None | None | None | None | N |
K/Q | 0.1466 | likely_benign | 0.1404 | benign | -0.031 | Destabilizing | 0.117 | N | 0.569 | neutral | N | 0.507254236 | None | None | N |
K/R | 0.0724 | likely_benign | 0.0716 | benign | -0.056 | Destabilizing | None | N | 0.246 | neutral | N | 0.440413168 | None | None | N |
K/S | 0.4575 | ambiguous | 0.4543 | ambiguous | -0.304 | Destabilizing | 0.003 | N | 0.242 | neutral | None | None | None | None | N |
K/T | 0.2059 | likely_benign | 0.2068 | benign | -0.16 | Destabilizing | 0.062 | N | 0.554 | neutral | N | 0.499616187 | None | None | N |
K/V | 0.3958 | ambiguous | 0.4009 | ambiguous | 0.351 | Stabilizing | 0.38 | N | 0.571 | neutral | None | None | None | None | N |
K/W | 0.7195 | likely_pathogenic | 0.7335 | pathogenic | -0.228 | Destabilizing | 0.935 | D | 0.635 | neutral | None | None | None | None | N |
K/Y | 0.6802 | likely_pathogenic | 0.6885 | pathogenic | 0.127 | Stabilizing | 0.555 | D | 0.592 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.