Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25125 | 75598;75599;75600 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
N2AB | 23484 | 70675;70676;70677 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
N2A | 22557 | 67894;67895;67896 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
N2B | 16060 | 48403;48404;48405 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
Novex-1 | 16185 | 48778;48779;48780 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
Novex-2 | 16252 | 48979;48980;48981 | chr2:178570759;178570758;178570757 | chr2:179435486;179435485;179435484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs764929320 | -0.814 | 0.979 | N | 0.531 | 0.25 | 0.200317383148 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
A/S | rs764929320 | -0.814 | 0.979 | N | 0.531 | 0.25 | 0.200317383148 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77408E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.687 | likely_pathogenic | 0.7347 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/D | 0.9135 | likely_pathogenic | 0.9373 | pathogenic | -1.203 | Destabilizing | 0.998 | D | 0.694 | prob.neutral | N | 0.488902111 | None | None | I |
A/E | 0.7999 | likely_pathogenic | 0.8532 | pathogenic | -1.351 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
A/F | 0.8215 | likely_pathogenic | 0.8449 | pathogenic | -1.171 | Destabilizing | 0.991 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/G | 0.3652 | ambiguous | 0.4237 | ambiguous | -0.705 | Destabilizing | 0.979 | D | 0.541 | neutral | N | 0.518616161 | None | None | I |
A/H | 0.8558 | likely_pathogenic | 0.8876 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
A/I | 0.6695 | likely_pathogenic | 0.6888 | pathogenic | -0.516 | Destabilizing | 0.938 | D | 0.627 | neutral | None | None | None | None | I |
A/K | 0.8297 | likely_pathogenic | 0.8789 | pathogenic | -1.065 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | I |
A/L | 0.652 | likely_pathogenic | 0.6792 | pathogenic | -0.516 | Destabilizing | 0.938 | D | 0.482 | neutral | None | None | None | None | I |
A/M | 0.6398 | likely_pathogenic | 0.6546 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/N | 0.7944 | likely_pathogenic | 0.8259 | pathogenic | -0.571 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/P | 0.9166 | likely_pathogenic | 0.9247 | pathogenic | -0.51 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | N | 0.473898501 | None | None | I |
A/Q | 0.7113 | likely_pathogenic | 0.7641 | pathogenic | -0.911 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/R | 0.7278 | likely_pathogenic | 0.7788 | pathogenic | -0.498 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/S | 0.1601 | likely_benign | 0.1723 | benign | -0.701 | Destabilizing | 0.979 | D | 0.531 | neutral | N | 0.474151991 | None | None | I |
A/T | 0.3444 | ambiguous | 0.329 | benign | -0.79 | Destabilizing | 0.958 | D | 0.671 | neutral | N | 0.478013105 | None | None | I |
A/V | 0.3522 | ambiguous | 0.3585 | ambiguous | -0.51 | Destabilizing | 0.142 | N | 0.398 | neutral | N | 0.496110869 | None | None | I |
A/W | 0.9684 | likely_pathogenic | 0.976 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/Y | 0.8966 | likely_pathogenic | 0.9181 | pathogenic | -1.03 | Destabilizing | 0.995 | D | 0.738 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.