Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25127 | 75604;75605;75606 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
N2AB | 23486 | 70681;70682;70683 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
N2A | 22559 | 67900;67901;67902 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
N2B | 16062 | 48409;48410;48411 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
Novex-1 | 16187 | 48784;48785;48786 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
Novex-2 | 16254 | 48985;48986;48987 | chr2:178570753;178570752;178570751 | chr2:179435480;179435479;179435478 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs768944134 | -1.107 | 0.892 | N | 0.519 | 0.376 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs768944134 | -1.107 | 0.892 | N | 0.519 | 0.376 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs768944134 | -1.107 | 0.892 | N | 0.519 | 0.376 | None | gnomAD-4.0.0 | 2.0301E-06 | None | None | None | None | N | None | 3.49565E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1833 | likely_benign | 0.2103 | benign | -0.533 | Destabilizing | 0.892 | D | 0.514 | neutral | N | 0.468141737 | None | None | N |
E/C | 0.819 | likely_pathogenic | 0.8617 | pathogenic | -0.034 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.0934 | likely_benign | 0.094 | benign | -0.584 | Destabilizing | 0.025 | N | 0.277 | neutral | N | 0.442260529 | None | None | N |
E/F | 0.7767 | likely_pathogenic | 0.8311 | pathogenic | -0.44 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/G | 0.1809 | likely_benign | 0.2105 | benign | -0.776 | Destabilizing | 0.892 | D | 0.519 | neutral | N | 0.485667376 | None | None | N |
E/H | 0.495 | ambiguous | 0.5744 | pathogenic | -0.491 | Destabilizing | 0.997 | D | 0.495 | neutral | None | None | None | None | N |
E/I | 0.5116 | ambiguous | 0.5657 | pathogenic | 0.087 | Stabilizing | 0.987 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/K | 0.1916 | likely_benign | 0.2404 | benign | 0.027 | Stabilizing | 0.805 | D | 0.464 | neutral | N | 0.510621749 | None | None | N |
E/L | 0.4976 | ambiguous | 0.563 | ambiguous | 0.087 | Stabilizing | 0.975 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/M | 0.4783 | ambiguous | 0.5434 | ambiguous | 0.39 | Stabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
E/N | 0.2245 | likely_benign | 0.2499 | benign | -0.254 | Destabilizing | 0.975 | D | 0.475 | neutral | None | None | None | None | N |
E/P | 0.9579 | likely_pathogenic | 0.9652 | pathogenic | -0.099 | Destabilizing | 0.987 | D | 0.558 | neutral | None | None | None | None | N |
E/Q | 0.1494 | likely_benign | 0.1787 | benign | -0.203 | Destabilizing | 0.204 | N | 0.293 | neutral | N | 0.483704506 | None | None | N |
E/R | 0.3451 | ambiguous | 0.4143 | ambiguous | 0.182 | Stabilizing | 0.95 | D | 0.489 | neutral | None | None | None | None | N |
E/S | 0.1837 | likely_benign | 0.213 | benign | -0.445 | Destabilizing | 0.916 | D | 0.482 | neutral | None | None | None | None | N |
E/T | 0.2489 | likely_benign | 0.2914 | benign | -0.253 | Destabilizing | 0.975 | D | 0.51 | neutral | None | None | None | None | N |
E/V | 0.293 | likely_benign | 0.3337 | benign | -0.099 | Destabilizing | 0.967 | D | 0.623 | neutral | N | 0.495907231 | None | None | N |
E/W | 0.9297 | likely_pathogenic | 0.9541 | pathogenic | -0.301 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.6376 | likely_pathogenic | 0.7075 | pathogenic | -0.21 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.