Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25128 | 75607;75608;75609 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
N2AB | 23487 | 70684;70685;70686 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
N2A | 22560 | 67903;67904;67905 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
N2B | 16063 | 48412;48413;48414 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
Novex-1 | 16188 | 48787;48788;48789 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
Novex-2 | 16255 | 48988;48989;48990 | chr2:178570750;178570749;178570748 | chr2:179435477;179435476;179435475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | None | N | 0.121 | 0.099 | 0.0297737177859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0781 | likely_benign | 0.0731 | benign | -0.719 | Destabilizing | None | N | 0.129 | neutral | N | 0.463771951 | None | None | N |
S/C | 0.0918 | likely_benign | 0.0896 | benign | -0.411 | Destabilizing | 0.356 | N | 0.393 | neutral | None | None | None | None | N |
S/D | 0.3714 | ambiguous | 0.3627 | ambiguous | 0.133 | Stabilizing | 0.072 | N | 0.181 | neutral | None | None | None | None | N |
S/E | 0.516 | ambiguous | 0.4874 | ambiguous | 0.104 | Stabilizing | 0.072 | N | 0.177 | neutral | None | None | None | None | N |
S/F | 0.2015 | likely_benign | 0.1861 | benign | -1.037 | Destabilizing | None | N | 0.228 | neutral | None | None | None | None | N |
S/G | 0.0931 | likely_benign | 0.0924 | benign | -0.93 | Destabilizing | 0.016 | N | 0.191 | neutral | None | None | None | None | N |
S/H | 0.3288 | likely_benign | 0.3036 | benign | -1.345 | Destabilizing | 0.628 | D | 0.393 | neutral | None | None | None | None | N |
S/I | 0.1286 | likely_benign | 0.1158 | benign | -0.273 | Destabilizing | 0.001 | N | 0.225 | neutral | None | None | None | None | N |
S/K | 0.6163 | likely_pathogenic | 0.5859 | pathogenic | -0.599 | Destabilizing | 0.072 | N | 0.175 | neutral | None | None | None | None | N |
S/L | 0.0908 | likely_benign | 0.0826 | benign | -0.273 | Destabilizing | None | N | 0.157 | neutral | N | 0.457897841 | None | None | N |
S/M | 0.159 | likely_benign | 0.1445 | benign | -0.017 | Destabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
S/N | 0.1099 | likely_benign | 0.1086 | benign | -0.453 | Destabilizing | 0.072 | N | 0.271 | neutral | None | None | None | None | N |
S/P | 0.1294 | likely_benign | 0.1413 | benign | -0.389 | Destabilizing | 0.295 | N | 0.453 | neutral | N | 0.447647706 | None | None | N |
S/Q | 0.4634 | ambiguous | 0.4278 | ambiguous | -0.604 | Destabilizing | 0.356 | N | 0.338 | neutral | None | None | None | None | N |
S/R | 0.5766 | likely_pathogenic | 0.5429 | ambiguous | -0.457 | Destabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | N |
S/T | 0.0683 | likely_benign | 0.0681 | benign | -0.537 | Destabilizing | None | N | 0.121 | neutral | N | 0.361143442 | None | None | N |
S/V | 0.1331 | likely_benign | 0.1184 | benign | -0.389 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
S/W | 0.3356 | likely_benign | 0.3092 | benign | -1.0 | Destabilizing | 0.676 | D | 0.375 | neutral | None | None | None | None | N |
S/Y | 0.1753 | likely_benign | 0.1633 | benign | -0.744 | Destabilizing | 0.12 | N | 0.445 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.