Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25131 | 75616;75617;75618 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
N2AB | 23490 | 70693;70694;70695 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
N2A | 22563 | 67912;67913;67914 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
N2B | 16066 | 48421;48422;48423 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
Novex-1 | 16191 | 48796;48797;48798 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
Novex-2 | 16258 | 48997;48998;48999 | chr2:178570741;178570740;178570739 | chr2:179435468;179435467;179435466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.055 | N | 0.626 | 0.206 | 0.154104182512 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3888 | ambiguous | 0.3852 | ambiguous | -2.003 | Highly Destabilizing | 0.005 | N | 0.481 | neutral | N | 0.516839298 | None | None | N |
V/C | 0.7539 | likely_pathogenic | 0.7604 | pathogenic | -1.528 | Destabilizing | 0.628 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/D | 0.9606 | likely_pathogenic | 0.962 | pathogenic | -2.383 | Highly Destabilizing | 0.295 | N | 0.783 | deleterious | N | 0.517012656 | None | None | N |
V/E | 0.9295 | likely_pathogenic | 0.9334 | pathogenic | -2.124 | Highly Destabilizing | 0.136 | N | 0.7 | prob.neutral | None | None | None | None | N |
V/F | 0.2234 | likely_benign | 0.2342 | benign | -1.259 | Destabilizing | 0.055 | N | 0.626 | neutral | N | 0.386957111 | None | None | N |
V/G | 0.6782 | likely_pathogenic | 0.6869 | pathogenic | -2.555 | Highly Destabilizing | 0.106 | N | 0.719 | prob.delet. | N | 0.517012656 | None | None | N |
V/H | 0.9557 | likely_pathogenic | 0.9586 | pathogenic | -2.195 | Highly Destabilizing | 0.864 | D | 0.823 | deleterious | None | None | None | None | N |
V/I | 0.0596 | likely_benign | 0.0579 | benign | -0.443 | Destabilizing | None | N | 0.227 | neutral | N | 0.353394403 | None | None | N |
V/K | 0.9403 | likely_pathogenic | 0.9496 | pathogenic | -1.602 | Destabilizing | 0.072 | N | 0.675 | prob.neutral | None | None | None | None | N |
V/L | 0.0972 | likely_benign | 0.1032 | benign | -0.443 | Destabilizing | None | N | 0.221 | neutral | N | 0.294161594 | None | None | N |
V/M | 0.1301 | likely_benign | 0.1284 | benign | -0.525 | Destabilizing | 0.001 | N | 0.381 | neutral | None | None | None | None | N |
V/N | 0.8944 | likely_pathogenic | 0.8941 | pathogenic | -2.03 | Highly Destabilizing | 0.356 | N | 0.78 | deleterious | None | None | None | None | N |
V/P | 0.9261 | likely_pathogenic | 0.922 | pathogenic | -0.939 | Destabilizing | 0.628 | D | 0.754 | deleterious | None | None | None | None | N |
V/Q | 0.9234 | likely_pathogenic | 0.9294 | pathogenic | -1.79 | Destabilizing | 0.356 | N | 0.752 | deleterious | None | None | None | None | N |
V/R | 0.9069 | likely_pathogenic | 0.9179 | pathogenic | -1.602 | Destabilizing | 0.214 | N | 0.783 | deleterious | None | None | None | None | N |
V/S | 0.7662 | likely_pathogenic | 0.7593 | pathogenic | -2.679 | Highly Destabilizing | 0.072 | N | 0.675 | neutral | None | None | None | None | N |
V/T | 0.5626 | ambiguous | 0.5473 | ambiguous | -2.251 | Highly Destabilizing | 0.031 | N | 0.534 | neutral | None | None | None | None | N |
V/W | 0.8824 | likely_pathogenic | 0.8942 | pathogenic | -1.666 | Destabilizing | 0.864 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.7669 | likely_pathogenic | 0.7883 | pathogenic | -1.282 | Destabilizing | 0.356 | N | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.