Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25136 | 75631;75632;75633 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
N2AB | 23495 | 70708;70709;70710 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
N2A | 22568 | 67927;67928;67929 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
N2B | 16071 | 48436;48437;48438 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
Novex-1 | 16196 | 48811;48812;48813 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
Novex-2 | 16263 | 49012;49013;49014 | chr2:178570726;178570725;178570724 | chr2:179435453;179435452;179435451 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | None | None | 0.029 | N | 0.391 | 0.141 | 0.279370189704 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2185 | likely_benign | 0.1947 | benign | -0.972 | Destabilizing | 0.016 | N | 0.299 | neutral | None | None | None | None | N |
Y/C | 0.0805 | likely_benign | 0.0786 | benign | -0.268 | Destabilizing | None | N | 0.283 | neutral | N | 0.516319223 | None | None | N |
Y/D | 0.1773 | likely_benign | 0.1502 | benign | 0.711 | Stabilizing | 0.055 | N | 0.385 | neutral | N | 0.451806385 | None | None | N |
Y/E | 0.3336 | likely_benign | 0.3176 | benign | 0.731 | Stabilizing | 0.038 | N | 0.35 | neutral | None | None | None | None | N |
Y/F | 0.0737 | likely_benign | 0.0718 | benign | -0.271 | Destabilizing | 0.055 | N | 0.295 | neutral | N | 0.478531626 | None | None | N |
Y/G | 0.2344 | likely_benign | 0.197 | benign | -1.192 | Destabilizing | 0.072 | N | 0.348 | neutral | None | None | None | None | N |
Y/H | 0.0554 | likely_benign | 0.0621 | benign | 0.147 | Stabilizing | None | N | 0.107 | neutral | N | 0.441360104 | None | None | N |
Y/I | 0.2427 | likely_benign | 0.2306 | benign | -0.383 | Destabilizing | 0.038 | N | 0.32 | neutral | None | None | None | None | N |
Y/K | 0.2552 | likely_benign | 0.2639 | benign | -0.191 | Destabilizing | 0.072 | N | 0.353 | neutral | None | None | None | None | N |
Y/L | 0.2212 | likely_benign | 0.2074 | benign | -0.383 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
Y/M | 0.4088 | ambiguous | 0.3785 | ambiguous | -0.362 | Destabilizing | 0.214 | N | 0.304 | neutral | None | None | None | None | N |
Y/N | 0.0993 | likely_benign | 0.0917 | benign | -0.546 | Destabilizing | 0.029 | N | 0.391 | neutral | N | 0.453230537 | None | None | N |
Y/P | 0.8324 | likely_pathogenic | 0.8221 | pathogenic | -0.563 | Destabilizing | 0.356 | N | 0.358 | neutral | None | None | None | None | N |
Y/Q | 0.168 | likely_benign | 0.1744 | benign | -0.428 | Destabilizing | 0.214 | N | 0.367 | neutral | None | None | None | None | N |
Y/R | 0.126 | likely_benign | 0.1417 | benign | 0.075 | Stabilizing | 0.214 | N | 0.371 | neutral | None | None | None | None | N |
Y/S | 0.0932 | likely_benign | 0.0799 | benign | -0.997 | Destabilizing | 0.002 | N | 0.261 | neutral | N | 0.3845226 | None | None | N |
Y/T | 0.1825 | likely_benign | 0.1649 | benign | -0.887 | Destabilizing | 0.072 | N | 0.347 | neutral | None | None | None | None | N |
Y/V | 0.2008 | likely_benign | 0.1936 | benign | -0.563 | Destabilizing | 0.038 | N | 0.305 | neutral | None | None | None | None | N |
Y/W | 0.2662 | likely_benign | 0.2659 | benign | -0.237 | Destabilizing | 0.864 | D | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.