Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25144 | 75655;75656;75657 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
N2AB | 23503 | 70732;70733;70734 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
N2A | 22576 | 67951;67952;67953 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
N2B | 16079 | 48460;48461;48462 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
Novex-1 | 16204 | 48835;48836;48837 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
Novex-2 | 16271 | 49036;49037;49038 | chr2:178570702;178570701;178570700 | chr2:179435429;179435428;179435427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | rs1168512437 | 0.634 | 0.213 | N | 0.493 | 0.231 | 0.373537453441 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/L | rs1168512437 | 0.634 | 0.213 | N | 0.493 | 0.231 | 0.373537453441 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1867 | likely_benign | 0.1991 | benign | -0.42 | Destabilizing | 0.129 | N | 0.434 | neutral | None | None | None | None | N |
Q/C | 0.3439 | ambiguous | 0.3995 | ambiguous | 0.008 | Stabilizing | 0.983 | D | 0.538 | neutral | None | None | None | None | N |
Q/D | 0.271 | likely_benign | 0.3088 | benign | -0.147 | Destabilizing | 0.129 | N | 0.416 | neutral | None | None | None | None | N |
Q/E | 0.0668 | likely_benign | 0.0688 | benign | -0.075 | Destabilizing | 0.001 | N | 0.169 | neutral | N | 0.436471573 | None | None | N |
Q/F | 0.463 | ambiguous | 0.5197 | ambiguous | -0.142 | Destabilizing | 0.836 | D | 0.531 | neutral | None | None | None | None | N |
Q/G | 0.2715 | likely_benign | 0.2931 | benign | -0.746 | Destabilizing | 0.228 | N | 0.471 | neutral | None | None | None | None | N |
Q/H | 0.1179 | likely_benign | 0.1309 | benign | -0.508 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.453790684 | None | None | N |
Q/I | 0.2256 | likely_benign | 0.2503 | benign | 0.391 | Stabilizing | 0.716 | D | 0.566 | neutral | None | None | None | None | N |
Q/K | 0.0927 | likely_benign | 0.0992 | benign | -0.241 | Destabilizing | 0.101 | N | 0.413 | neutral | N | 0.467949273 | None | None | N |
Q/L | 0.0999 | likely_benign | 0.1135 | benign | 0.391 | Stabilizing | 0.213 | N | 0.493 | neutral | N | 0.502101919 | None | None | N |
Q/M | 0.2498 | likely_benign | 0.2734 | benign | 0.564 | Stabilizing | 0.94 | D | 0.479 | neutral | None | None | None | None | N |
Q/N | 0.2168 | likely_benign | 0.242 | benign | -0.721 | Destabilizing | 0.228 | N | 0.395 | neutral | None | None | None | None | N |
Q/P | 0.7187 | likely_pathogenic | 0.7678 | pathogenic | 0.152 | Stabilizing | 0.523 | D | 0.533 | neutral | N | 0.503356192 | None | None | N |
Q/R | 0.0978 | likely_benign | 0.1058 | benign | -0.163 | Destabilizing | 0.002 | N | 0.181 | neutral | N | 0.44888351 | None | None | N |
Q/S | 0.1654 | likely_benign | 0.1786 | benign | -0.785 | Destabilizing | 0.129 | N | 0.417 | neutral | None | None | None | None | N |
Q/T | 0.1195 | likely_benign | 0.1255 | benign | -0.525 | Destabilizing | 0.002 | N | 0.273 | neutral | None | None | None | None | N |
Q/V | 0.1552 | likely_benign | 0.1718 | benign | 0.152 | Stabilizing | 0.264 | N | 0.532 | neutral | None | None | None | None | N |
Q/W | 0.3876 | ambiguous | 0.4376 | ambiguous | -0.05 | Destabilizing | 0.983 | D | 0.54 | neutral | None | None | None | None | N |
Q/Y | 0.2743 | likely_benign | 0.3223 | benign | 0.167 | Stabilizing | 0.418 | N | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.