Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2515 | 7768;7769;7770 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
N2AB | 2515 | 7768;7769;7770 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
N2A | 2515 | 7768;7769;7770 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
N2B | 2469 | 7630;7631;7632 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
Novex-1 | 2469 | 7630;7631;7632 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
Novex-2 | 2469 | 7630;7631;7632 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
Novex-3 | 2515 | 7768;7769;7770 | chr2:178773513;178773512;178773511 | chr2:179638240;179638239;179638238 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.99 | D | 0.715 | 0.823 | 0.678009228414 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8297 | likely_pathogenic | 0.8343 | pathogenic | -2.891 | Highly Destabilizing | 0.754 | D | 0.783 | deleterious | None | None | None | None | N |
Y/C | 0.162 | likely_benign | 0.169 | benign | -2.139 | Highly Destabilizing | 0.032 | N | 0.704 | prob.neutral | D | 0.783441886 | None | None | N |
Y/D | 0.991 | likely_pathogenic | 0.9893 | pathogenic | -3.524 | Highly Destabilizing | 0.942 | D | 0.874 | deleterious | D | 0.783441886 | None | None | N |
Y/E | 0.9906 | likely_pathogenic | 0.9895 | pathogenic | -3.292 | Highly Destabilizing | 0.956 | D | 0.819 | deleterious | None | None | None | None | N |
Y/F | 0.099 | likely_benign | 0.1109 | benign | -1.092 | Destabilizing | 0.904 | D | 0.684 | prob.neutral | D | 0.648698486 | None | None | N |
Y/G | 0.8655 | likely_pathogenic | 0.8567 | pathogenic | -3.344 | Highly Destabilizing | 0.754 | D | 0.823 | deleterious | None | None | None | None | N |
Y/H | 0.8353 | likely_pathogenic | 0.834 | pathogenic | -2.246 | Highly Destabilizing | 0.99 | D | 0.715 | prob.delet. | D | 0.784062607 | None | None | N |
Y/I | 0.5113 | ambiguous | 0.5296 | ambiguous | -1.383 | Destabilizing | 0.956 | D | 0.759 | deleterious | None | None | None | None | N |
Y/K | 0.9862 | likely_pathogenic | 0.9848 | pathogenic | -2.435 | Highly Destabilizing | 0.956 | D | 0.813 | deleterious | None | None | None | None | N |
Y/L | 0.46 | ambiguous | 0.4606 | ambiguous | -1.383 | Destabilizing | 0.754 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/M | 0.7372 | likely_pathogenic | 0.7526 | pathogenic | -1.317 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
Y/N | 0.9126 | likely_pathogenic | 0.9049 | pathogenic | -3.368 | Highly Destabilizing | 0.942 | D | 0.849 | deleterious | D | 0.783441886 | None | None | N |
Y/P | 0.9908 | likely_pathogenic | 0.9896 | pathogenic | -1.902 | Destabilizing | 0.978 | D | 0.884 | deleterious | None | None | None | None | N |
Y/Q | 0.9709 | likely_pathogenic | 0.9695 | pathogenic | -3.0 | Highly Destabilizing | 0.956 | D | 0.774 | deleterious | None | None | None | None | N |
Y/R | 0.9455 | likely_pathogenic | 0.9418 | pathogenic | -2.405 | Highly Destabilizing | 0.956 | D | 0.858 | deleterious | None | None | None | None | N |
Y/S | 0.8246 | likely_pathogenic | 0.8165 | pathogenic | -3.703 | Highly Destabilizing | 0.125 | N | 0.681 | prob.neutral | D | 0.783441886 | None | None | N |
Y/T | 0.8867 | likely_pathogenic | 0.8876 | pathogenic | -3.33 | Highly Destabilizing | 0.754 | D | 0.809 | deleterious | None | None | None | None | N |
Y/V | 0.3283 | likely_benign | 0.3405 | ambiguous | -1.902 | Destabilizing | 0.86 | D | 0.747 | deleterious | None | None | None | None | N |
Y/W | 0.6231 | likely_pathogenic | 0.6272 | pathogenic | -0.454 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.