Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25160 | 75703;75704;75705 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
N2AB | 23519 | 70780;70781;70782 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
N2A | 22592 | 67999;68000;68001 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
N2B | 16095 | 48508;48509;48510 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
Novex-1 | 16220 | 48883;48884;48885 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
Novex-2 | 16287 | 49084;49085;49086 | chr2:178570654;178570653;178570652 | chr2:179435381;179435380;179435379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | None | None | 0.97 | N | 0.646 | 0.683 | 0.894683481021 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7779 | likely_pathogenic | 0.8583 | pathogenic | -2.277 | Highly Destabilizing | 0.86 | D | 0.467 | neutral | None | None | None | None | N |
I/C | 0.8007 | likely_pathogenic | 0.8597 | pathogenic | -1.724 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | N |
I/D | 0.9566 | likely_pathogenic | 0.976 | pathogenic | -1.562 | Destabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | N |
I/E | 0.841 | likely_pathogenic | 0.9 | pathogenic | -1.435 | Destabilizing | 0.978 | D | 0.662 | neutral | None | None | None | None | N |
I/F | 0.2378 | likely_benign | 0.2842 | benign | -1.492 | Destabilizing | 0.043 | N | 0.297 | neutral | None | None | None | None | N |
I/G | 0.8983 | likely_pathogenic | 0.9421 | pathogenic | -2.741 | Highly Destabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | N |
I/H | 0.8205 | likely_pathogenic | 0.8834 | pathogenic | -1.952 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/K | 0.6493 | likely_pathogenic | 0.7511 | pathogenic | -1.498 | Destabilizing | 0.97 | D | 0.646 | neutral | N | 0.51915995 | None | None | N |
I/L | 0.1719 | likely_benign | 0.2099 | benign | -0.998 | Destabilizing | 0.006 | N | 0.126 | neutral | N | 0.494784591 | None | None | N |
I/M | 0.0989 | likely_benign | 0.1108 | benign | -0.957 | Destabilizing | 0.942 | D | 0.501 | neutral | N | 0.493912444 | None | None | N |
I/N | 0.6469 | likely_pathogenic | 0.7529 | pathogenic | -1.516 | Destabilizing | 0.993 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/P | 0.9727 | likely_pathogenic | 0.9831 | pathogenic | -1.399 | Destabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/Q | 0.714 | likely_pathogenic | 0.797 | pathogenic | -1.528 | Destabilizing | 0.993 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/R | 0.5862 | likely_pathogenic | 0.6978 | pathogenic | -1.094 | Destabilizing | 0.97 | D | 0.679 | prob.neutral | D | 0.535542685 | None | None | N |
I/S | 0.7549 | likely_pathogenic | 0.8392 | pathogenic | -2.349 | Highly Destabilizing | 0.978 | D | 0.562 | neutral | None | None | None | None | N |
I/T | 0.6909 | likely_pathogenic | 0.793 | pathogenic | -2.075 | Highly Destabilizing | 0.822 | D | 0.512 | neutral | N | 0.518145992 | None | None | N |
I/V | 0.1229 | likely_benign | 0.1452 | benign | -1.399 | Destabilizing | 0.294 | N | 0.378 | neutral | N | 0.513526847 | None | None | N |
I/W | 0.8009 | likely_pathogenic | 0.8411 | pathogenic | -1.624 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/Y | 0.606 | likely_pathogenic | 0.6895 | pathogenic | -1.385 | Destabilizing | 0.915 | D | 0.529 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.