Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25167 | 75724;75725;75726 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
N2AB | 23526 | 70801;70802;70803 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
N2A | 22599 | 68020;68021;68022 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
N2B | 16102 | 48529;48530;48531 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
Novex-1 | 16227 | 48904;48905;48906 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
Novex-2 | 16294 | 49105;49106;49107 | chr2:178570633;178570632;178570631 | chr2:179435360;179435359;179435358 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1396100350 | 0.515 | 0.97 | N | 0.718 | 0.479 | 0.304760801415 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
T/I | rs1396100350 | 0.515 | 0.97 | N | 0.718 | 0.479 | 0.304760801415 | gnomAD-4.0.0 | 2.05299E-06 | None | None | None | None | N | None | 2.99007E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31889E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.087 | likely_benign | 0.0873 | benign | -1.309 | Destabilizing | 0.025 | N | 0.465 | neutral | N | 0.448434353 | None | None | N |
T/C | 0.4215 | ambiguous | 0.4264 | ambiguous | -1.054 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/D | 0.9176 | likely_pathogenic | 0.9411 | pathogenic | -1.412 | Destabilizing | 0.956 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/E | 0.9049 | likely_pathogenic | 0.9384 | pathogenic | -1.22 | Destabilizing | 0.86 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/F | 0.6662 | likely_pathogenic | 0.7322 | pathogenic | -1.25 | Destabilizing | 0.978 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/G | 0.5025 | ambiguous | 0.5373 | ambiguous | -1.713 | Destabilizing | 0.754 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/H | 0.7604 | likely_pathogenic | 0.8113 | pathogenic | -1.9 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/I | 0.5141 | ambiguous | 0.5653 | pathogenic | -0.248 | Destabilizing | 0.97 | D | 0.718 | prob.delet. | N | 0.479543587 | None | None | N |
T/K | 0.8985 | likely_pathogenic | 0.936 | pathogenic | -0.507 | Destabilizing | 0.86 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/L | 0.3078 | likely_benign | 0.3359 | benign | -0.248 | Destabilizing | 0.86 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/M | 0.1974 | likely_benign | 0.2117 | benign | -0.088 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/N | 0.5564 | ambiguous | 0.6139 | pathogenic | -1.252 | Destabilizing | 0.942 | D | 0.753 | deleterious | N | 0.45793384 | None | None | N |
T/P | 0.9083 | likely_pathogenic | 0.9308 | pathogenic | -0.571 | Destabilizing | 0.97 | D | 0.708 | prob.delet. | N | 0.487140911 | None | None | N |
T/Q | 0.8033 | likely_pathogenic | 0.8519 | pathogenic | -1.063 | Destabilizing | 0.956 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/R | 0.8434 | likely_pathogenic | 0.8978 | pathogenic | -0.708 | Destabilizing | 0.956 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/S | 0.1673 | likely_benign | 0.1743 | benign | -1.54 | Destabilizing | 0.058 | N | 0.527 | neutral | N | 0.445490048 | None | None | N |
T/V | 0.2508 | likely_benign | 0.2817 | benign | -0.571 | Destabilizing | 0.86 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/W | 0.955 | likely_pathogenic | 0.9706 | pathogenic | -1.315 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.7692 | likely_pathogenic | 0.8293 | pathogenic | -0.951 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.