Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25181 | 75766;75767;75768 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
N2AB | 23540 | 70843;70844;70845 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
N2A | 22613 | 68062;68063;68064 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
N2B | 16116 | 48571;48572;48573 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
Novex-1 | 16241 | 48946;48947;48948 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
Novex-2 | 16308 | 49147;49148;49149 | chr2:178570591;178570590;178570589 | chr2:179435318;179435317;179435316 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | None | N | 0.113 | 0.187 | 0.239305524855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1238 | likely_benign | 0.1355 | benign | -1.028 | Destabilizing | 0.007 | N | 0.3 | neutral | None | None | None | None | N |
N/C | 0.1278 | likely_benign | 0.1437 | benign | -0.036 | Destabilizing | 0.676 | D | 0.473 | neutral | None | None | None | None | N |
N/D | 0.1196 | likely_benign | 0.1318 | benign | -0.178 | Destabilizing | 0.012 | N | 0.25 | neutral | N | 0.473317807 | None | None | N |
N/E | 0.1956 | likely_benign | 0.2442 | benign | -0.109 | Destabilizing | 0.007 | N | 0.167 | neutral | None | None | None | None | N |
N/F | 0.2978 | likely_benign | 0.331 | benign | -0.899 | Destabilizing | 0.356 | N | 0.535 | neutral | None | None | None | None | N |
N/G | 0.2167 | likely_benign | 0.2354 | benign | -1.335 | Destabilizing | 0.016 | N | 0.203 | neutral | None | None | None | None | N |
N/H | 0.0732 | likely_benign | 0.0775 | benign | -1.018 | Destabilizing | None | N | 0.113 | neutral | N | 0.47633947 | None | None | N |
N/I | 0.0896 | likely_benign | 0.1017 | benign | -0.258 | Destabilizing | 0.055 | N | 0.562 | neutral | N | 0.43300998 | None | None | N |
N/K | 0.1383 | likely_benign | 0.1662 | benign | -0.145 | Destabilizing | None | N | 0.117 | neutral | N | 0.434335345 | None | None | N |
N/L | 0.1285 | likely_benign | 0.1367 | benign | -0.258 | Destabilizing | 0.031 | N | 0.386 | neutral | None | None | None | None | N |
N/M | 0.1842 | likely_benign | 0.2007 | benign | 0.239 | Stabilizing | 0.628 | D | 0.49 | neutral | None | None | None | None | N |
N/P | 0.3191 | likely_benign | 0.3873 | ambiguous | -0.486 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
N/Q | 0.1505 | likely_benign | 0.1745 | benign | -0.751 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
N/R | 0.1571 | likely_benign | 0.1835 | benign | -0.108 | Destabilizing | 0.016 | N | 0.253 | neutral | None | None | None | None | N |
N/S | 0.0749 | likely_benign | 0.0745 | benign | -0.784 | Destabilizing | None | N | 0.119 | neutral | N | 0.464004891 | None | None | N |
N/T | 0.0768 | likely_benign | 0.0822 | benign | -0.517 | Destabilizing | 0.012 | N | 0.243 | neutral | N | 0.393067512 | None | None | N |
N/V | 0.0974 | likely_benign | 0.1107 | benign | -0.486 | Destabilizing | 0.072 | N | 0.455 | neutral | None | None | None | None | N |
N/W | 0.5627 | ambiguous | 0.6078 | pathogenic | -0.603 | Destabilizing | 0.864 | D | 0.486 | neutral | None | None | None | None | N |
N/Y | 0.1006 | likely_benign | 0.1174 | benign | -0.429 | Destabilizing | 0.055 | N | 0.556 | neutral | N | 0.513953708 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.