Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25184 | 75775;75776;75777 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
N2AB | 23543 | 70852;70853;70854 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
N2A | 22616 | 68071;68072;68073 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
N2B | 16119 | 48580;48581;48582 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
Novex-1 | 16244 | 48955;48956;48957 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
Novex-2 | 16311 | 49156;49157;49158 | chr2:178570582;178570581;178570580 | chr2:179435309;179435308;179435307 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.618 | N | 0.708 | 0.103 | 0.128392430309 | gnomAD-4.0.0 | 6.84375E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52678E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9054 | likely_pathogenic | 0.9347 | pathogenic | -2.654 | Highly Destabilizing | 0.968 | D | 0.754 | deleterious | None | None | None | None | N |
L/C | 0.7861 | likely_pathogenic | 0.8468 | pathogenic | -1.786 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -3.196 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9951 | likely_pathogenic | 0.9968 | pathogenic | -2.942 | Highly Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.6142 | likely_pathogenic | 0.677 | pathogenic | -1.644 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
L/G | 0.9858 | likely_pathogenic | 0.9912 | pathogenic | -3.219 | Highly Destabilizing | 0.995 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9854 | likely_pathogenic | 0.9909 | pathogenic | -2.696 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/I | 0.096 | likely_benign | 0.102 | benign | -0.998 | Destabilizing | 0.086 | N | 0.412 | neutral | None | None | None | None | N |
L/K | 0.9899 | likely_pathogenic | 0.9938 | pathogenic | -2.112 | Highly Destabilizing | 0.995 | D | 0.887 | deleterious | None | None | None | None | N |
L/M | 0.295 | likely_benign | 0.3321 | benign | -0.83 | Destabilizing | 0.988 | D | 0.747 | deleterious | N | 0.475152722 | None | None | N |
L/N | 0.9956 | likely_pathogenic | 0.997 | pathogenic | -2.562 | Highly Destabilizing | 0.998 | D | 0.91 | deleterious | None | None | None | None | N |
L/P | 0.9919 | likely_pathogenic | 0.9948 | pathogenic | -1.534 | Destabilizing | 0.998 | D | 0.909 | deleterious | N | 0.505284846 | None | None | N |
L/Q | 0.9725 | likely_pathogenic | 0.982 | pathogenic | -2.389 | Highly Destabilizing | 0.999 | D | 0.913 | deleterious | N | 0.505284846 | None | None | N |
L/R | 0.9781 | likely_pathogenic | 0.9859 | pathogenic | -1.862 | Destabilizing | 0.998 | D | 0.906 | deleterious | N | 0.505284846 | None | None | N |
L/S | 0.9873 | likely_pathogenic | 0.9919 | pathogenic | -3.211 | Highly Destabilizing | 0.995 | D | 0.889 | deleterious | None | None | None | None | N |
L/T | 0.9479 | likely_pathogenic | 0.9633 | pathogenic | -2.806 | Highly Destabilizing | 0.991 | D | 0.817 | deleterious | None | None | None | None | N |
L/V | 0.118 | likely_benign | 0.1294 | benign | -1.534 | Destabilizing | 0.618 | D | 0.708 | prob.delet. | N | 0.501498046 | None | None | N |
L/W | 0.9465 | likely_pathogenic | 0.9667 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/Y | 0.9627 | likely_pathogenic | 0.9766 | pathogenic | -1.78 | Destabilizing | 0.995 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.