Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25192 | 75799;75800;75801 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
N2AB | 23551 | 70876;70877;70878 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
N2A | 22624 | 68095;68096;68097 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
N2B | 16127 | 48604;48605;48606 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
Novex-1 | 16252 | 48979;48980;48981 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
Novex-2 | 16319 | 49180;49181;49182 | chr2:178570558;178570557;178570556 | chr2:179435285;179435284;179435283 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | -0.644 | 0.999 | N | 0.71 | 0.625 | 0.557519804684 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | None | -0.644 | 0.999 | N | 0.71 | 0.625 | 0.557519804684 | gnomAD-4.0.0 | 6.84394E-07 | None | None | None | None | I | None | 0 | 2.23784E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs998111823 | None | 1.0 | D | 0.673 | 0.632 | 0.617623114376 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs998111823 | None | 1.0 | D | 0.673 | 0.632 | 0.617623114376 | gnomAD-4.0.0 | 2.47949E-06 | None | None | None | None | I | None | 5.3416E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.167 | likely_benign | 0.1912 | benign | -0.404 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | N | 0.505041714 | None | None | I |
E/C | 0.7841 | likely_pathogenic | 0.8237 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/D | 0.1657 | likely_benign | 0.1676 | benign | -0.374 | Destabilizing | 0.999 | D | 0.495 | neutral | N | 0.505802182 | None | None | I |
E/F | 0.6712 | likely_pathogenic | 0.6972 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/G | 0.1981 | likely_benign | 0.2217 | benign | -0.6 | Destabilizing | 1.0 | D | 0.673 | neutral | D | 0.524666906 | None | None | I |
E/H | 0.4604 | ambiguous | 0.5014 | ambiguous | 0.003 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/I | 0.304 | likely_benign | 0.3381 | benign | 0.078 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/K | 0.1907 | likely_benign | 0.2205 | benign | 0.368 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.518050019 | None | None | I |
E/L | 0.4124 | ambiguous | 0.4489 | ambiguous | 0.078 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/M | 0.3978 | ambiguous | 0.428 | ambiguous | 0.158 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/N | 0.283 | likely_benign | 0.2982 | benign | -0.013 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/P | 0.9022 | likely_pathogenic | 0.9234 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/Q | 0.135 | likely_benign | 0.1515 | benign | 0.021 | Stabilizing | 1.0 | D | 0.635 | neutral | D | 0.532520826 | None | None | I |
E/R | 0.3314 | likely_benign | 0.3827 | ambiguous | 0.57 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
E/S | 0.1534 | likely_benign | 0.167 | benign | -0.157 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/T | 0.1579 | likely_benign | 0.1784 | benign | 0.007 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/V | 0.1863 | likely_benign | 0.2084 | benign | -0.063 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.493889672 | None | None | I |
E/W | 0.8653 | likely_pathogenic | 0.8894 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/Y | 0.5736 | likely_pathogenic | 0.6229 | pathogenic | None | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.