Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25193 | 75802;75803;75804 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
N2AB | 23552 | 70879;70880;70881 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
N2A | 22625 | 68098;68099;68100 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
N2B | 16128 | 48607;48608;48609 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
Novex-1 | 16253 | 48982;48983;48984 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
Novex-2 | 16320 | 49183;49184;49185 | chr2:178570555;178570554;178570553 | chr2:179435282;179435281;179435280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1175414210 | -1.831 | None | D | 0.163 | 0.203 | 0.337135696972 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | None | None | 0.012 | N | 0.353 | 0.088 | 0.223146558224 | gnomAD-4.0.0 | 1.59229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2063 | likely_benign | 0.2347 | benign | -0.061 | Destabilizing | 0.007 | N | 0.23 | neutral | None | None | None | None | N |
R/C | 0.1284 | likely_benign | 0.1433 | benign | -0.313 | Destabilizing | 0.676 | D | 0.467 | neutral | None | None | None | None | N |
R/D | 0.54 | ambiguous | 0.5794 | pathogenic | -0.079 | Destabilizing | 0.072 | N | 0.429 | neutral | None | None | None | None | N |
R/E | 0.2646 | likely_benign | 0.2922 | benign | -0.01 | Destabilizing | 0.016 | N | 0.238 | neutral | None | None | None | None | N |
R/F | 0.3825 | ambiguous | 0.4386 | ambiguous | -0.281 | Destabilizing | 0.214 | N | 0.52 | neutral | None | None | None | None | N |
R/G | 0.1976 | likely_benign | 0.2126 | benign | -0.255 | Destabilizing | None | N | 0.163 | neutral | D | 0.526266858 | None | None | N |
R/H | 0.1079 | likely_benign | 0.1141 | benign | -0.7 | Destabilizing | 0.356 | N | 0.38 | neutral | None | None | None | None | N |
R/I | 0.1298 | likely_benign | 0.1611 | benign | 0.415 | Stabilizing | 0.01 | N | 0.516 | neutral | N | 0.463236886 | None | None | N |
R/K | 0.0696 | likely_benign | 0.0688 | benign | -0.155 | Destabilizing | None | N | 0.049 | neutral | N | 0.404207226 | None | None | N |
R/L | 0.1647 | likely_benign | 0.188 | benign | 0.415 | Stabilizing | 0.016 | N | 0.357 | neutral | None | None | None | None | N |
R/M | 0.1358 | likely_benign | 0.1534 | benign | -0.059 | Destabilizing | 0.214 | N | 0.456 | neutral | None | None | None | None | N |
R/N | 0.3593 | ambiguous | 0.3991 | ambiguous | -0.01 | Destabilizing | 0.072 | N | 0.215 | neutral | None | None | None | None | N |
R/P | 0.8871 | likely_pathogenic | 0.9023 | pathogenic | 0.277 | Stabilizing | 0.136 | N | 0.521 | neutral | None | None | None | None | N |
R/Q | 0.0901 | likely_benign | 0.0933 | benign | -0.083 | Destabilizing | 0.038 | N | 0.279 | neutral | None | None | None | None | N |
R/S | 0.291 | likely_benign | 0.3222 | benign | -0.369 | Destabilizing | 0.012 | N | 0.353 | neutral | N | 0.490402058 | None | None | N |
R/T | 0.1198 | likely_benign | 0.1297 | benign | -0.163 | Destabilizing | 0.024 | N | 0.349 | neutral | N | 0.461466018 | None | None | N |
R/V | 0.1726 | likely_benign | 0.2056 | benign | 0.277 | Stabilizing | None | N | 0.21 | neutral | None | None | None | None | N |
R/W | 0.2055 | likely_benign | 0.2315 | benign | -0.335 | Destabilizing | 0.864 | D | 0.472 | neutral | None | None | None | None | N |
R/Y | 0.2791 | likely_benign | 0.3279 | benign | 0.075 | Stabilizing | 0.356 | N | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.