Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25207 | 75844;75845;75846 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
N2AB | 23566 | 70921;70922;70923 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
N2A | 22639 | 68140;68141;68142 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
N2B | 16142 | 48649;48650;48651 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
Novex-1 | 16267 | 49024;49025;49026 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
Novex-2 | 16334 | 49225;49226;49227 | chr2:178570513;178570512;178570511 | chr2:179435240;179435239;179435238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs72646900 | -0.823 | 0.957 | N | 0.886 | 0.422 | 0.439339381091 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.93E-05 | 0 |
P/R | rs72646900 | -0.823 | 0.957 | N | 0.886 | 0.422 | 0.439339381091 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
P/R | rs72646900 | -0.823 | 0.957 | N | 0.886 | 0.422 | 0.439339381091 | gnomAD-4.0.0 | 2.16963E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88236E-05 | 0 | 1.60185E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1328 | likely_benign | 0.119 | benign | -1.695 | Destabilizing | 0.865 | D | 0.804 | deleterious | N | 0.480939134 | None | None | I |
P/C | 0.5473 | ambiguous | 0.5554 | ambiguous | -1.097 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | I |
P/D | 0.8593 | likely_pathogenic | 0.8598 | pathogenic | -1.832 | Destabilizing | 0.983 | D | 0.849 | deleterious | None | None | None | None | I |
P/E | 0.5889 | likely_pathogenic | 0.5702 | pathogenic | -1.825 | Destabilizing | 0.895 | D | 0.833 | deleterious | None | None | None | None | I |
P/F | 0.6237 | likely_pathogenic | 0.6102 | pathogenic | -1.311 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | I |
P/G | 0.6096 | likely_pathogenic | 0.6142 | pathogenic | -2.019 | Highly Destabilizing | 0.983 | D | 0.859 | deleterious | None | None | None | None | I |
P/H | 0.3704 | ambiguous | 0.3692 | ambiguous | -1.588 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | I |
P/I | 0.3895 | ambiguous | 0.3506 | ambiguous | -0.889 | Destabilizing | 0.992 | D | 0.878 | deleterious | None | None | None | None | I |
P/K | 0.3652 | ambiguous | 0.3676 | ambiguous | -1.358 | Destabilizing | 0.968 | D | 0.847 | deleterious | None | None | None | None | I |
P/L | 0.1857 | likely_benign | 0.172 | benign | -0.889 | Destabilizing | 0.978 | D | 0.879 | deleterious | D | 0.524635274 | None | None | I |
P/M | 0.3915 | ambiguous | 0.3725 | ambiguous | -0.678 | Destabilizing | 0.998 | D | 0.88 | deleterious | None | None | None | None | I |
P/N | 0.6862 | likely_pathogenic | 0.6865 | pathogenic | -1.155 | Destabilizing | 0.983 | D | 0.879 | deleterious | None | None | None | None | I |
P/Q | 0.2778 | likely_benign | 0.2675 | benign | -1.352 | Destabilizing | 0.476 | N | 0.589 | neutral | N | 0.511339958 | None | None | I |
P/R | 0.2662 | likely_benign | 0.2621 | benign | -0.836 | Destabilizing | 0.957 | D | 0.886 | deleterious | N | 0.518594886 | None | None | I |
P/S | 0.2914 | likely_benign | 0.269 | benign | -1.644 | Destabilizing | 0.957 | D | 0.849 | deleterious | N | 0.498413489 | None | None | I |
P/T | 0.2741 | likely_benign | 0.2451 | benign | -1.539 | Destabilizing | 0.978 | D | 0.845 | deleterious | N | 0.510138643 | None | None | I |
P/V | 0.3032 | likely_benign | 0.273 | benign | -1.125 | Destabilizing | 0.983 | D | 0.879 | deleterious | None | None | None | None | I |
P/W | 0.8291 | likely_pathogenic | 0.8323 | pathogenic | -1.522 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | I |
P/Y | 0.659 | likely_pathogenic | 0.639 | pathogenic | -1.249 | Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.