Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2520775844;75845;75846 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
N2AB2356670921;70922;70923 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
N2A2263968140;68141;68142 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
N2B1614248649;48650;48651 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
Novex-11626749024;49025;49026 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
Novex-21633449225;49226;49227 chr2:178570513;178570512;178570511chr2:179435240;179435239;179435238
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-71
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.3217
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/R rs72646900 -0.823 0.957 N 0.886 0.422 0.439339381091 gnomAD-2.1.1 1.79E-05 None None None None I None 0 0 None 0 0 None 0 None 0 3.93E-05 0
P/R rs72646900 -0.823 0.957 N 0.886 0.422 0.439339381091 gnomAD-3.1.2 1.97E-05 None None None None I None 0 0 0 0 0 None 0 0 4.41E-05 0 0
P/R rs72646900 -0.823 0.957 N 0.886 0.422 0.439339381091 gnomAD-4.0.0 2.16963E-05 None None None None I None 0 0 None 0 0 None 0 0 2.88236E-05 0 1.60185E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.1328 likely_benign 0.119 benign -1.695 Destabilizing 0.865 D 0.804 deleterious N 0.480939134 None None I
P/C 0.5473 ambiguous 0.5554 ambiguous -1.097 Destabilizing 0.999 D 0.862 deleterious None None None None I
P/D 0.8593 likely_pathogenic 0.8598 pathogenic -1.832 Destabilizing 0.983 D 0.849 deleterious None None None None I
P/E 0.5889 likely_pathogenic 0.5702 pathogenic -1.825 Destabilizing 0.895 D 0.833 deleterious None None None None I
P/F 0.6237 likely_pathogenic 0.6102 pathogenic -1.311 Destabilizing 0.999 D 0.885 deleterious None None None None I
P/G 0.6096 likely_pathogenic 0.6142 pathogenic -2.019 Highly Destabilizing 0.983 D 0.859 deleterious None None None None I
P/H 0.3704 ambiguous 0.3692 ambiguous -1.588 Destabilizing 0.998 D 0.879 deleterious None None None None I
P/I 0.3895 ambiguous 0.3506 ambiguous -0.889 Destabilizing 0.992 D 0.878 deleterious None None None None I
P/K 0.3652 ambiguous 0.3676 ambiguous -1.358 Destabilizing 0.968 D 0.847 deleterious None None None None I
P/L 0.1857 likely_benign 0.172 benign -0.889 Destabilizing 0.978 D 0.879 deleterious D 0.524635274 None None I
P/M 0.3915 ambiguous 0.3725 ambiguous -0.678 Destabilizing 0.998 D 0.88 deleterious None None None None I
P/N 0.6862 likely_pathogenic 0.6865 pathogenic -1.155 Destabilizing 0.983 D 0.879 deleterious None None None None I
P/Q 0.2778 likely_benign 0.2675 benign -1.352 Destabilizing 0.476 N 0.589 neutral N 0.511339958 None None I
P/R 0.2662 likely_benign 0.2621 benign -0.836 Destabilizing 0.957 D 0.886 deleterious N 0.518594886 None None I
P/S 0.2914 likely_benign 0.269 benign -1.644 Destabilizing 0.957 D 0.849 deleterious N 0.498413489 None None I
P/T 0.2741 likely_benign 0.2451 benign -1.539 Destabilizing 0.978 D 0.845 deleterious N 0.510138643 None None I
P/V 0.3032 likely_benign 0.273 benign -1.125 Destabilizing 0.983 D 0.879 deleterious None None None None I
P/W 0.8291 likely_pathogenic 0.8323 pathogenic -1.522 Destabilizing 0.999 D 0.859 deleterious None None None None I
P/Y 0.659 likely_pathogenic 0.639 pathogenic -1.249 Destabilizing 0.998 D 0.883 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.