Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25209 | 75850;75851;75852 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
N2AB | 23568 | 70927;70928;70929 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
N2A | 22641 | 68146;68147;68148 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
N2B | 16144 | 48655;48656;48657 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
Novex-1 | 16269 | 49030;49031;49032 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
Novex-2 | 16336 | 49231;49232;49233 | chr2:178570507;178570506;178570505 | chr2:179435234;179435233;179435232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs773767237 | -0.765 | 0.008 | N | 0.405 | 0.127 | 0.176091768786 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs773767237 | -0.765 | 0.008 | N | 0.405 | 0.127 | 0.176091768786 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
E/K | rs773767237 | -0.765 | 0.008 | N | 0.405 | 0.127 | 0.176091768786 | gnomAD-4.0.0 | 1.15378E-05 | None | None | None | None | N | None | 0 | 1.01778E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 8.53922E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1171 | likely_benign | 0.1214 | benign | -0.638 | Destabilizing | 0.565 | D | 0.519 | neutral | N | 0.456304474 | None | None | N |
E/C | 0.7399 | likely_pathogenic | 0.7691 | pathogenic | -0.464 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
E/D | 0.2465 | likely_benign | 0.2636 | benign | -0.858 | Destabilizing | 0.003 | N | 0.211 | neutral | N | 0.452496165 | None | None | N |
E/F | 0.7599 | likely_pathogenic | 0.7796 | pathogenic | -0.011 | Destabilizing | 0.987 | D | 0.784 | deleterious | None | None | None | None | N |
E/G | 0.1909 | likely_benign | 0.1928 | benign | -0.974 | Destabilizing | 0.722 | D | 0.625 | neutral | N | 0.474332875 | None | None | N |
E/H | 0.5451 | ambiguous | 0.5754 | pathogenic | -0.096 | Destabilizing | 0.989 | D | 0.547 | neutral | None | None | None | None | N |
E/I | 0.2902 | likely_benign | 0.3115 | benign | 0.267 | Stabilizing | 0.961 | D | 0.767 | deleterious | None | None | None | None | N |
E/K | 0.1851 | likely_benign | 0.1982 | benign | -0.454 | Destabilizing | 0.008 | N | 0.405 | neutral | N | 0.489358255 | None | None | N |
E/L | 0.3636 | ambiguous | 0.3941 | ambiguous | 0.267 | Stabilizing | 0.923 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/M | 0.3758 | ambiguous | 0.4104 | ambiguous | 0.45 | Stabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
E/N | 0.3884 | ambiguous | 0.4136 | ambiguous | -0.952 | Destabilizing | 0.775 | D | 0.545 | neutral | None | None | None | None | N |
E/P | 0.8729 | likely_pathogenic | 0.8922 | pathogenic | -0.013 | Destabilizing | 0.961 | D | 0.601 | neutral | None | None | None | None | N |
E/Q | 0.1304 | likely_benign | 0.1351 | benign | -0.809 | Destabilizing | 0.565 | D | 0.55 | neutral | N | 0.45495768 | None | None | N |
E/R | 0.2931 | likely_benign | 0.3118 | benign | -0.085 | Destabilizing | 0.858 | D | 0.541 | neutral | None | None | None | None | N |
E/S | 0.1926 | likely_benign | 0.2106 | benign | -1.191 | Destabilizing | 0.633 | D | 0.505 | neutral | None | None | None | None | N |
E/T | 0.2024 | likely_benign | 0.2189 | benign | -0.914 | Destabilizing | 0.923 | D | 0.593 | neutral | None | None | None | None | N |
E/V | 0.1506 | likely_benign | 0.1598 | benign | -0.013 | Destabilizing | 0.901 | D | 0.683 | prob.neutral | N | 0.478602544 | None | None | N |
E/W | 0.9276 | likely_pathogenic | 0.9395 | pathogenic | 0.24 | Stabilizing | 0.996 | D | 0.788 | deleterious | None | None | None | None | N |
E/Y | 0.665 | likely_pathogenic | 0.6935 | pathogenic | 0.229 | Stabilizing | 0.987 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.