Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25212 | 75859;75860;75861 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
N2AB | 23571 | 70936;70937;70938 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
N2A | 22644 | 68155;68156;68157 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
N2B | 16147 | 48664;48665;48666 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
Novex-1 | 16272 | 49039;49040;49041 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
Novex-2 | 16339 | 49240;49241;49242 | chr2:178570498;178570497;178570496 | chr2:179435225;179435224;179435223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.052 | N | 0.677 | 0.196 | 0.400756358115 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | rs1707781335 | None | None | N | 0.319 | 0.047 | 0.149567049428 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.027E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3226 | likely_benign | 0.3819 | ambiguous | -1.434 | Destabilizing | 0.052 | N | 0.677 | prob.neutral | N | 0.473831682 | None | None | N |
V/C | 0.8304 | likely_pathogenic | 0.8676 | pathogenic | -1.084 | Destabilizing | 0.935 | D | 0.757 | deleterious | None | None | None | None | N |
V/D | 0.973 | likely_pathogenic | 0.9798 | pathogenic | -1.401 | Destabilizing | 0.484 | N | 0.827 | deleterious | N | 0.492189427 | None | None | N |
V/E | 0.9447 | likely_pathogenic | 0.9574 | pathogenic | -1.227 | Destabilizing | 0.555 | D | 0.778 | deleterious | None | None | None | None | N |
V/F | 0.4721 | ambiguous | 0.4763 | ambiguous | -0.735 | Destabilizing | 0.317 | N | 0.772 | deleterious | N | 0.517849657 | None | None | N |
V/G | 0.6901 | likely_pathogenic | 0.7445 | pathogenic | -1.926 | Destabilizing | 0.484 | N | 0.79 | deleterious | N | 0.504306201 | None | None | N |
V/H | 0.9739 | likely_pathogenic | 0.9812 | pathogenic | -1.715 | Destabilizing | 0.935 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.0776 | likely_benign | 0.0769 | benign | -0.11 | Destabilizing | None | N | 0.194 | neutral | N | 0.424400779 | None | None | N |
V/K | 0.9581 | likely_pathogenic | 0.9695 | pathogenic | -1.192 | Destabilizing | 0.555 | D | 0.777 | deleterious | None | None | None | None | N |
V/L | 0.1854 | likely_benign | 0.2002 | benign | -0.11 | Destabilizing | None | N | 0.319 | neutral | N | 0.373539523 | None | None | N |
V/M | 0.2547 | likely_benign | 0.2654 | benign | -0.248 | Destabilizing | 0.38 | N | 0.653 | neutral | None | None | None | None | N |
V/N | 0.9161 | likely_pathogenic | 0.9356 | pathogenic | -1.356 | Destabilizing | 0.791 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.6591 | likely_pathogenic | 0.7382 | pathogenic | -0.518 | Destabilizing | 0.791 | D | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.9398 | likely_pathogenic | 0.9556 | pathogenic | -1.211 | Destabilizing | 0.791 | D | 0.806 | deleterious | None | None | None | None | N |
V/R | 0.9369 | likely_pathogenic | 0.9543 | pathogenic | -1.122 | Destabilizing | 0.555 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.7227 | likely_pathogenic | 0.781 | pathogenic | -2.003 | Highly Destabilizing | 0.262 | N | 0.765 | deleterious | None | None | None | None | N |
V/T | 0.5053 | ambiguous | 0.57 | pathogenic | -1.682 | Destabilizing | 0.149 | N | 0.733 | prob.delet. | None | None | None | None | N |
V/W | 0.9715 | likely_pathogenic | 0.9773 | pathogenic | -1.181 | Destabilizing | 0.935 | D | 0.8 | deleterious | None | None | None | None | N |
V/Y | 0.9068 | likely_pathogenic | 0.9292 | pathogenic | -0.748 | Destabilizing | 0.555 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.