Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25214 | 75865;75866;75867 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
N2AB | 23573 | 70942;70943;70944 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
N2A | 22646 | 68161;68162;68163 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
N2B | 16149 | 48670;48671;48672 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
Novex-1 | 16274 | 49045;49046;49047 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
Novex-2 | 16341 | 49246;49247;49248 | chr2:178570492;178570491;178570490 | chr2:179435219;179435218;179435217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1241605082 | -1.858 | 0.124 | N | 0.637 | 0.21 | 0.687524581047 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66445E-04 |
I/T | rs1241605082 | -1.858 | 0.124 | N | 0.637 | 0.21 | 0.687524581047 | gnomAD-4.0.0 | 1.59229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02718E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4973 | ambiguous | 0.5279 | ambiguous | -1.724 | Destabilizing | 0.005 | N | 0.329 | neutral | None | None | None | None | N |
I/C | 0.6405 | likely_pathogenic | 0.7048 | pathogenic | -1.217 | Destabilizing | 0.909 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/D | 0.9406 | likely_pathogenic | 0.9482 | pathogenic | -0.779 | Destabilizing | 0.726 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9001 | likely_pathogenic | 0.9112 | pathogenic | -0.711 | Destabilizing | 0.726 | D | 0.807 | deleterious | None | None | None | None | N |
I/F | 0.1554 | likely_benign | 0.1786 | benign | -1.04 | Destabilizing | 0.497 | N | 0.603 | neutral | N | 0.488561327 | None | None | N |
I/G | 0.8316 | likely_pathogenic | 0.8555 | pathogenic | -2.118 | Highly Destabilizing | 0.567 | D | 0.77 | deleterious | None | None | None | None | N |
I/H | 0.78 | likely_pathogenic | 0.8263 | pathogenic | -1.294 | Destabilizing | 0.968 | D | 0.811 | deleterious | None | None | None | None | N |
I/K | 0.779 | likely_pathogenic | 0.8085 | pathogenic | -1.159 | Destabilizing | 0.726 | D | 0.807 | deleterious | None | None | None | None | N |
I/L | 0.1471 | likely_benign | 0.1515 | benign | -0.69 | Destabilizing | 0.025 | N | 0.428 | neutral | N | 0.496084732 | None | None | N |
I/M | 0.1746 | likely_benign | 0.1769 | benign | -0.66 | Destabilizing | 0.497 | N | 0.577 | neutral | N | 0.481879397 | None | None | N |
I/N | 0.6575 | likely_pathogenic | 0.6868 | pathogenic | -1.073 | Destabilizing | 0.859 | D | 0.84 | deleterious | N | 0.505517061 | None | None | N |
I/P | 0.741 | likely_pathogenic | 0.7748 | pathogenic | -1.004 | Destabilizing | 0.726 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.7882 | likely_pathogenic | 0.8248 | pathogenic | -1.113 | Destabilizing | 0.89 | D | 0.831 | deleterious | None | None | None | None | N |
I/R | 0.6895 | likely_pathogenic | 0.7307 | pathogenic | -0.726 | Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
I/S | 0.5561 | ambiguous | 0.5972 | pathogenic | -1.818 | Destabilizing | 0.124 | N | 0.729 | prob.delet. | N | 0.486652337 | None | None | N |
I/T | 0.4375 | ambiguous | 0.4749 | ambiguous | -1.608 | Destabilizing | 0.124 | N | 0.637 | neutral | N | 0.475549521 | None | None | N |
I/V | 0.0737 | likely_benign | 0.074 | benign | -1.004 | Destabilizing | None | N | 0.19 | neutral | N | 0.392050713 | None | None | N |
I/W | 0.8471 | likely_pathogenic | 0.878 | pathogenic | -1.127 | Destabilizing | 0.968 | D | 0.809 | deleterious | None | None | None | None | N |
I/Y | 0.6029 | likely_pathogenic | 0.675 | pathogenic | -0.896 | Destabilizing | 0.726 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.