Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25217 | 75874;75875;75876 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
N2AB | 23576 | 70951;70952;70953 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
N2A | 22649 | 68170;68171;68172 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
N2B | 16152 | 48679;48680;48681 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
Novex-1 | 16277 | 49054;49055;49056 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
Novex-2 | 16344 | 49255;49256;49257 | chr2:178570483;178570482;178570481 | chr2:179435210;179435209;179435208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1292869028 | -0.503 | 0.014 | N | 0.187 | 0.057 | 0.257786959452 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1292869028 | -0.503 | 0.014 | N | 0.187 | 0.057 | 0.257786959452 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78396E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.396 | ambiguous | 0.4044 | ambiguous | -1.191 | Destabilizing | 0.822 | D | 0.443 | neutral | N | 0.473600965 | None | None | N |
V/C | 0.7457 | likely_pathogenic | 0.7962 | pathogenic | -1.079 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/D | 0.7998 | likely_pathogenic | 0.8116 | pathogenic | -0.922 | Destabilizing | 0.99 | D | 0.803 | deleterious | N | 0.519622071 | None | None | N |
V/E | 0.6447 | likely_pathogenic | 0.6566 | pathogenic | -0.974 | Destabilizing | 0.993 | D | 0.76 | deleterious | None | None | None | None | N |
V/F | 0.2595 | likely_benign | 0.2675 | benign | -1.247 | Destabilizing | 0.942 | D | 0.741 | deleterious | N | 0.498012324 | None | None | N |
V/G | 0.4428 | ambiguous | 0.4653 | ambiguous | -1.421 | Destabilizing | 0.971 | D | 0.799 | deleterious | N | 0.509115139 | None | None | N |
V/H | 0.8041 | likely_pathogenic | 0.8334 | pathogenic | -1.005 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
V/I | 0.0612 | likely_benign | 0.0627 | benign | -0.687 | Destabilizing | 0.014 | N | 0.187 | neutral | N | 0.462665591 | None | None | N |
V/K | 0.5389 | ambiguous | 0.5617 | ambiguous | -0.833 | Destabilizing | 0.978 | D | 0.762 | deleterious | None | None | None | None | N |
V/L | 0.2168 | likely_benign | 0.2326 | benign | -0.687 | Destabilizing | 0.247 | N | 0.323 | neutral | N | 0.499954543 | None | None | N |
V/M | 0.154 | likely_benign | 0.1549 | benign | -0.549 | Destabilizing | 0.956 | D | 0.668 | neutral | None | None | None | None | N |
V/N | 0.5729 | likely_pathogenic | 0.5956 | pathogenic | -0.627 | Destabilizing | 0.993 | D | 0.802 | deleterious | None | None | None | None | N |
V/P | 0.7514 | likely_pathogenic | 0.7909 | pathogenic | -0.821 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
V/Q | 0.5554 | ambiguous | 0.5803 | pathogenic | -0.883 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
V/R | 0.5312 | ambiguous | 0.5697 | pathogenic | -0.359 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
V/S | 0.4965 | ambiguous | 0.5214 | ambiguous | -1.142 | Destabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | N |
V/T | 0.3451 | ambiguous | 0.3563 | ambiguous | -1.089 | Destabilizing | 0.86 | D | 0.563 | neutral | None | None | None | None | N |
V/W | 0.8896 | likely_pathogenic | 0.9089 | pathogenic | -1.332 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.6841 | likely_pathogenic | 0.7276 | pathogenic | -1.008 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.