Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2522 | 7789;7790;7791 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
N2AB | 2522 | 7789;7790;7791 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
N2A | 2522 | 7789;7790;7791 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
N2B | 2476 | 7651;7652;7653 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
Novex-1 | 2476 | 7651;7652;7653 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
Novex-2 | 2476 | 7651;7652;7653 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
Novex-3 | 2522 | 7789;7790;7791 | chr2:178773492;178773491;178773490 | chr2:179638219;179638218;179638217 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1163155086 | None | 0.489 | N | 0.545 | 0.191 | 0.258779203287 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1101 | likely_benign | 0.1065 | benign | -0.946 | Destabilizing | 0.489 | N | 0.545 | neutral | N | 0.438221487 | None | None | N |
V/C | 0.6665 | likely_pathogenic | 0.6491 | pathogenic | -0.742 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
V/D | 0.3826 | ambiguous | 0.3712 | ambiguous | -0.692 | Destabilizing | 0.942 | D | 0.683 | prob.neutral | N | 0.446996539 | None | None | N |
V/E | 0.271 | likely_benign | 0.2718 | benign | -0.739 | Destabilizing | 0.956 | D | 0.59 | neutral | None | None | None | None | N |
V/F | 0.2085 | likely_benign | 0.1998 | benign | -0.773 | Destabilizing | 0.942 | D | 0.631 | neutral | N | 0.475171803 | None | None | N |
V/G | 0.209 | likely_benign | 0.2027 | benign | -1.191 | Destabilizing | 0.698 | D | 0.646 | neutral | N | 0.447853438 | None | None | N |
V/H | 0.4956 | ambiguous | 0.4831 | ambiguous | -0.746 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/I | 0.0912 | likely_benign | 0.0888 | benign | -0.409 | Destabilizing | 0.489 | N | 0.571 | neutral | N | 0.448157154 | None | None | N |
V/K | 0.2632 | likely_benign | 0.2633 | benign | -0.937 | Destabilizing | 0.956 | D | 0.591 | neutral | None | None | None | None | N |
V/L | 0.2521 | likely_benign | 0.2438 | benign | -0.409 | Destabilizing | 0.489 | N | 0.526 | neutral | N | 0.437151705 | None | None | N |
V/M | 0.1446 | likely_benign | 0.1402 | benign | -0.402 | Destabilizing | 0.559 | D | 0.482 | neutral | None | None | None | None | N |
V/N | 0.253 | likely_benign | 0.2518 | benign | -0.691 | Destabilizing | 0.956 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/P | 0.8981 | likely_pathogenic | 0.8804 | pathogenic | -0.551 | Destabilizing | 0.978 | D | 0.667 | neutral | None | None | None | None | N |
V/Q | 0.2737 | likely_benign | 0.2688 | benign | -0.871 | Destabilizing | 0.956 | D | 0.669 | neutral | None | None | None | None | N |
V/R | 0.2557 | likely_benign | 0.2569 | benign | -0.425 | Destabilizing | 0.956 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/S | 0.1535 | likely_benign | 0.1545 | benign | -1.124 | Destabilizing | 0.16 | N | 0.434 | neutral | None | None | None | None | N |
V/T | 0.112 | likely_benign | 0.1103 | benign | -1.066 | Destabilizing | 0.754 | D | 0.532 | neutral | None | None | None | None | N |
V/W | 0.8213 | likely_pathogenic | 0.7949 | pathogenic | -0.926 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Y | 0.5376 | ambiguous | 0.5234 | ambiguous | -0.639 | Destabilizing | 0.993 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.