Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25224 | 75895;75896;75897 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
N2AB | 23583 | 70972;70973;70974 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
N2A | 22656 | 68191;68192;68193 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
N2B | 16159 | 48700;48701;48702 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
Novex-1 | 16284 | 49075;49076;49077 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
Novex-2 | 16351 | 49276;49277;49278 | chr2:178570462;178570461;178570460 | chr2:179435189;179435188;179435187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.02 | N | 0.241 | 0.057 | 0.183819452728 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7694 | likely_pathogenic | 0.8324 | pathogenic | -2.453 | Highly Destabilizing | 0.953 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/C | 0.7709 | likely_pathogenic | 0.8452 | pathogenic | -1.912 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -2.763 | Highly Destabilizing | 0.998 | D | 0.92 | deleterious | None | None | None | None | N |
L/E | 0.9948 | likely_pathogenic | 0.9969 | pathogenic | -2.462 | Highly Destabilizing | 0.998 | D | 0.914 | deleterious | None | None | None | None | N |
L/F | 0.4458 | ambiguous | 0.5626 | ambiguous | -1.473 | Destabilizing | 0.986 | D | 0.662 | neutral | None | None | None | None | N |
L/G | 0.9803 | likely_pathogenic | 0.9881 | pathogenic | -3.077 | Highly Destabilizing | 0.998 | D | 0.909 | deleterious | None | None | None | None | N |
L/H | 0.9863 | likely_pathogenic | 0.9913 | pathogenic | -2.742 | Highly Destabilizing | 0.999 | D | 0.909 | deleterious | None | None | None | None | N |
L/I | 0.0788 | likely_benign | 0.0819 | benign | -0.612 | Destabilizing | 0.02 | N | 0.241 | neutral | N | 0.514774854 | None | None | N |
L/K | 0.9913 | likely_pathogenic | 0.9949 | pathogenic | -1.797 | Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.2405 | likely_benign | 0.2774 | benign | -0.774 | Destabilizing | 0.986 | D | 0.624 | neutral | None | None | None | None | N |
L/N | 0.9959 | likely_pathogenic | 0.9973 | pathogenic | -2.346 | Highly Destabilizing | 0.998 | D | 0.927 | deleterious | None | None | None | None | N |
L/P | 0.9872 | likely_pathogenic | 0.993 | pathogenic | -1.21 | Destabilizing | 0.997 | D | 0.93 | deleterious | D | 0.56264248 | None | None | N |
L/Q | 0.9799 | likely_pathogenic | 0.9884 | pathogenic | -2.039 | Highly Destabilizing | 0.997 | D | 0.911 | deleterious | D | 0.56264248 | None | None | N |
L/R | 0.9791 | likely_pathogenic | 0.9879 | pathogenic | -1.831 | Destabilizing | 0.997 | D | 0.891 | deleterious | D | 0.56264248 | None | None | N |
L/S | 0.9797 | likely_pathogenic | 0.9863 | pathogenic | -3.074 | Highly Destabilizing | 0.993 | D | 0.85 | deleterious | None | None | None | None | N |
L/T | 0.8783 | likely_pathogenic | 0.9158 | pathogenic | -2.593 | Highly Destabilizing | 0.986 | D | 0.769 | deleterious | None | None | None | None | N |
L/V | 0.0718 | likely_benign | 0.082 | benign | -1.21 | Destabilizing | 0.76 | D | 0.391 | neutral | N | 0.508230097 | None | None | N |
L/W | 0.9446 | likely_pathogenic | 0.9672 | pathogenic | -1.875 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
L/Y | 0.9476 | likely_pathogenic | 0.9704 | pathogenic | -1.564 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.