Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25225 | 75898;75899;75900 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
N2AB | 23584 | 70975;70976;70977 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
N2A | 22657 | 68194;68195;68196 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
N2B | 16160 | 48703;48704;48705 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
Novex-1 | 16285 | 49078;49079;49080 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
Novex-2 | 16352 | 49279;49280;49281 | chr2:178570459;178570458;178570457 | chr2:179435186;179435185;179435184 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.811 | N | 0.615 | 0.266 | 0.484329738948 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78489E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2638 | likely_benign | 0.3248 | benign | -0.682 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
A/D | 0.2685 | likely_benign | 0.3209 | benign | -0.976 | Destabilizing | 0.896 | D | 0.751 | deleterious | N | 0.518788233 | None | None | N |
A/E | 0.2248 | likely_benign | 0.2546 | benign | -0.904 | Destabilizing | 0.919 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/F | 0.1743 | likely_benign | 0.2039 | benign | -0.602 | Destabilizing | 0.988 | D | 0.763 | deleterious | None | None | None | None | N |
A/G | 0.1256 | likely_benign | 0.1391 | benign | -1.014 | Destabilizing | 0.64 | D | 0.596 | neutral | N | 0.495892731 | None | None | N |
A/H | 0.2765 | likely_benign | 0.3244 | benign | -1.297 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
A/I | 0.1493 | likely_benign | 0.1729 | benign | 0.206 | Stabilizing | 0.976 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/K | 0.3977 | ambiguous | 0.4445 | ambiguous | -0.907 | Destabilizing | 0.919 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/L | 0.1019 | likely_benign | 0.1143 | benign | 0.206 | Stabilizing | 0.851 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/M | 0.1316 | likely_benign | 0.1541 | benign | 0.079 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/N | 0.1688 | likely_benign | 0.198 | benign | -0.88 | Destabilizing | 0.976 | D | 0.748 | deleterious | None | None | None | None | N |
A/P | 0.8568 | likely_pathogenic | 0.903 | pathogenic | -0.035 | Destabilizing | 0.984 | D | 0.73 | prob.delet. | N | 0.498956467 | None | None | N |
A/Q | 0.2334 | likely_benign | 0.2626 | benign | -0.849 | Destabilizing | 0.988 | D | 0.755 | deleterious | None | None | None | None | N |
A/R | 0.3392 | likely_benign | 0.3834 | ambiguous | -0.819 | Destabilizing | 0.976 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/S | 0.068 | likely_benign | 0.0724 | benign | -1.308 | Destabilizing | 0.046 | N | 0.249 | neutral | N | 0.375329034 | None | None | N |
A/T | 0.0657 | likely_benign | 0.0703 | benign | -1.114 | Destabilizing | 0.103 | N | 0.463 | neutral | N | 0.453677962 | None | None | N |
A/V | 0.0963 | likely_benign | 0.1084 | benign | -0.035 | Destabilizing | 0.811 | D | 0.615 | neutral | N | 0.502069341 | None | None | N |
A/W | 0.5066 | ambiguous | 0.5852 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
A/Y | 0.2547 | likely_benign | 0.3055 | benign | -0.602 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.