Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2523 | 7792;7793;7794 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
N2AB | 2523 | 7792;7793;7794 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
N2A | 2523 | 7792;7793;7794 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
N2B | 2477 | 7654;7655;7656 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
Novex-1 | 2477 | 7654;7655;7656 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
Novex-2 | 2477 | 7654;7655;7656 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
Novex-3 | 2523 | 7792;7793;7794 | chr2:178773489;178773488;178773487 | chr2:179638216;179638215;179638214 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.003 | D | 0.351 | 0.229 | 0.246215685461 | gnomAD-4.0.0 | 1.59075E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8568E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.141 | likely_benign | 0.1372 | benign | -0.559 | Destabilizing | 0.309 | N | 0.483 | neutral | N | 0.437467856 | None | None | N |
E/C | 0.8167 | likely_pathogenic | 0.8096 | pathogenic | -0.25 | Destabilizing | 0.996 | D | 0.554 | neutral | None | None | None | None | N |
E/D | 0.1953 | likely_benign | 0.1824 | benign | -0.564 | Destabilizing | 0.003 | N | 0.225 | neutral | N | 0.449977391 | None | None | N |
E/F | 0.7719 | likely_pathogenic | 0.7657 | pathogenic | -0.225 | Destabilizing | 0.984 | D | 0.557 | neutral | None | None | None | None | N |
E/G | 0.2244 | likely_benign | 0.2135 | benign | -0.812 | Destabilizing | 0.003 | N | 0.351 | neutral | D | 0.550183544 | None | None | N |
E/H | 0.4848 | ambiguous | 0.4758 | ambiguous | -0.098 | Destabilizing | 0.953 | D | 0.511 | neutral | None | None | None | None | N |
E/I | 0.4026 | ambiguous | 0.3946 | ambiguous | 0.096 | Stabilizing | 0.984 | D | 0.574 | neutral | None | None | None | None | N |
E/K | 0.2094 | likely_benign | 0.1995 | benign | 0.032 | Stabilizing | 0.684 | D | 0.497 | neutral | N | 0.448931333 | None | None | N |
E/L | 0.5025 | ambiguous | 0.4809 | ambiguous | 0.096 | Stabilizing | 0.953 | D | 0.567 | neutral | None | None | None | None | N |
E/M | 0.4655 | ambiguous | 0.4636 | ambiguous | 0.228 | Stabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
E/N | 0.3134 | likely_benign | 0.3006 | benign | -0.414 | Destabilizing | 0.037 | N | 0.233 | neutral | None | None | None | None | N |
E/P | 0.8955 | likely_pathogenic | 0.8588 | pathogenic | -0.101 | Destabilizing | 0.984 | D | 0.553 | neutral | None | None | None | None | N |
E/Q | 0.131 | likely_benign | 0.1316 | benign | -0.342 | Destabilizing | 0.815 | D | 0.475 | neutral | N | 0.455391537 | None | None | N |
E/R | 0.3467 | ambiguous | 0.3303 | benign | 0.32 | Stabilizing | 0.953 | D | 0.512 | neutral | None | None | None | None | N |
E/S | 0.1774 | likely_benign | 0.1749 | benign | -0.589 | Destabilizing | 0.543 | D | 0.503 | neutral | None | None | None | None | N |
E/T | 0.2045 | likely_benign | 0.1988 | benign | -0.38 | Destabilizing | 0.742 | D | 0.467 | neutral | None | None | None | None | N |
E/V | 0.2229 | likely_benign | 0.2154 | benign | -0.101 | Destabilizing | 0.939 | D | 0.567 | neutral | N | 0.435565091 | None | None | N |
E/W | 0.9216 | likely_pathogenic | 0.9144 | pathogenic | -0.004 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
E/Y | 0.6962 | likely_pathogenic | 0.6896 | pathogenic | 0.025 | Stabilizing | 0.984 | D | 0.561 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.