Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25232 | 75919;75920;75921 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
N2AB | 23591 | 70996;70997;70998 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
N2A | 22664 | 68215;68216;68217 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
N2B | 16167 | 48724;48725;48726 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
Novex-1 | 16292 | 49099;49100;49101 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
Novex-2 | 16359 | 49300;49301;49302 | chr2:178570438;178570437;178570436 | chr2:179435165;179435164;179435163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.441 | 0.348 | 0.34854441366 | gnomAD-4.0.0 | 6.84436E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99599E-07 | 0 | 0 |
D/N | rs912960791 | None | 1.0 | N | 0.679 | 0.407 | 0.48461828368 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7335 | likely_pathogenic | 0.7602 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.496843327 | None | None | I |
D/C | 0.9449 | likely_pathogenic | 0.9567 | pathogenic | 0.199 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
D/E | 0.7378 | likely_pathogenic | 0.7659 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.441 | neutral | N | 0.498956467 | None | None | I |
D/F | 0.9619 | likely_pathogenic | 0.9679 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
D/G | 0.6523 | likely_pathogenic | 0.7027 | pathogenic | -0.418 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.520418538 | None | None | I |
D/H | 0.8414 | likely_pathogenic | 0.8654 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.51965807 | None | None | I |
D/I | 0.9034 | likely_pathogenic | 0.9066 | pathogenic | 0.447 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
D/K | 0.9249 | likely_pathogenic | 0.937 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
D/L | 0.9112 | likely_pathogenic | 0.916 | pathogenic | 0.447 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/M | 0.9531 | likely_pathogenic | 0.9583 | pathogenic | 0.862 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
D/N | 0.1898 | likely_benign | 0.1918 | benign | -0.121 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.468623761 | None | None | I |
D/P | 0.9675 | likely_pathogenic | 0.9717 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
D/Q | 0.9032 | likely_pathogenic | 0.9112 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
D/R | 0.9324 | likely_pathogenic | 0.9411 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/S | 0.4575 | ambiguous | 0.5038 | ambiguous | -0.25 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
D/T | 0.6521 | likely_pathogenic | 0.6835 | pathogenic | -0.054 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
D/V | 0.7854 | likely_pathogenic | 0.7931 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | D | 0.52589904 | None | None | I |
D/W | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
D/Y | 0.7419 | likely_pathogenic | 0.7688 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.635 | neutral | D | 0.538522793 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.