Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25236 | 75931;75932;75933 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
N2AB | 23595 | 71008;71009;71010 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
N2A | 22668 | 68227;68228;68229 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
N2B | 16171 | 48736;48737;48738 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
Novex-1 | 16296 | 49111;49112;49113 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
Novex-2 | 16363 | 49312;49313;49314 | chr2:178570426;178570425;178570424 | chr2:179435153;179435152;179435151 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.067 | N | 0.201 | 0.044 | 0.0297737177859 | gnomAD-4.0.0 | 6.84467E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99612E-07 | 0 | 0 |
D/N | rs1707754880 | None | 0.988 | N | 0.666 | 0.245 | 0.222439326576 | gnomAD-4.0.0 | 3.18544E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71961E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.105 | likely_benign | 0.1243 | benign | -0.22 | Destabilizing | 0.958 | D | 0.582 | neutral | N | 0.413199563 | None | None | I |
D/C | 0.4697 | ambiguous | 0.5431 | ambiguous | 0.124 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
D/E | 0.1145 | likely_benign | 0.124 | benign | -0.246 | Destabilizing | 0.067 | N | 0.201 | neutral | N | 0.388223761 | None | None | I |
D/F | 0.5719 | likely_pathogenic | 0.6157 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/G | 0.1449 | likely_benign | 0.1587 | benign | -0.4 | Destabilizing | 0.958 | D | 0.61 | neutral | N | 0.449891082 | None | None | I |
D/H | 0.2111 | likely_benign | 0.2405 | benign | -0.089 | Destabilizing | 0.998 | D | 0.635 | neutral | N | 0.494604651 | None | None | I |
D/I | 0.281 | likely_benign | 0.3205 | benign | 0.2 | Stabilizing | 0.995 | D | 0.663 | neutral | None | None | None | None | I |
D/K | 0.218 | likely_benign | 0.26 | benign | 0.411 | Stabilizing | 0.982 | D | 0.629 | neutral | None | None | None | None | I |
D/L | 0.3009 | likely_benign | 0.347 | ambiguous | 0.2 | Stabilizing | 0.991 | D | 0.658 | neutral | None | None | None | None | I |
D/M | 0.4727 | ambiguous | 0.5301 | ambiguous | 0.346 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
D/N | 0.0828 | likely_benign | 0.0869 | benign | 0.143 | Stabilizing | 0.988 | D | 0.666 | neutral | N | 0.458702566 | None | None | I |
D/P | 0.3061 | likely_benign | 0.3832 | ambiguous | 0.082 | Stabilizing | 0.995 | D | 0.66 | neutral | None | None | None | None | I |
D/Q | 0.2317 | likely_benign | 0.2634 | benign | 0.171 | Stabilizing | 0.982 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/R | 0.291 | likely_benign | 0.335 | benign | 0.511 | Stabilizing | 0.991 | D | 0.667 | neutral | None | None | None | None | I |
D/S | 0.0972 | likely_benign | 0.1018 | benign | 0.045 | Stabilizing | 0.968 | D | 0.598 | neutral | None | None | None | None | I |
D/T | 0.164 | likely_benign | 0.1804 | benign | 0.187 | Stabilizing | 0.991 | D | 0.624 | neutral | None | None | None | None | I |
D/V | 0.1566 | likely_benign | 0.1836 | benign | 0.082 | Stabilizing | 0.994 | D | 0.657 | neutral | N | 0.506744442 | None | None | I |
D/W | 0.872 | likely_pathogenic | 0.8954 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/Y | 0.2334 | likely_benign | 0.2608 | benign | None | Stabilizing | 0.999 | D | 0.642 | neutral | N | 0.507611234 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.