Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25240 | 75943;75944;75945 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
N2AB | 23599 | 71020;71021;71022 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
N2A | 22672 | 68239;68240;68241 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
N2B | 16175 | 48748;48749;48750 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
Novex-1 | 16300 | 49123;49124;49125 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
Novex-2 | 16367 | 49324;49325;49326 | chr2:178570414;178570413;178570412 | chr2:179435141;179435140;179435139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1259012958 | -3.086 | 1.0 | D | 0.816 | 0.867 | 0.785863580201 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Y/H | rs1259012958 | -3.086 | 1.0 | D | 0.816 | 0.867 | 0.785863580201 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9966 | likely_pathogenic | 0.9974 | pathogenic | -3.722 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Y/C | 0.8935 | likely_pathogenic | 0.9168 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.660924104 | None | None | N |
Y/D | 0.996 | likely_pathogenic | 0.9973 | pathogenic | -3.914 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.661327712 | None | None | N |
Y/E | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -3.692 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/F | 0.2414 | likely_benign | 0.273 | benign | -1.543 | Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.551081658 | None | None | N |
Y/G | 0.9907 | likely_pathogenic | 0.9926 | pathogenic | -4.124 | Highly Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
Y/H | 0.9675 | likely_pathogenic | 0.9776 | pathogenic | -2.838 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.644904743 | None | None | N |
Y/I | 0.9758 | likely_pathogenic | 0.9819 | pathogenic | -2.343 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9985 | likely_pathogenic | 0.9992 | pathogenic | -2.598 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/L | 0.9518 | likely_pathogenic | 0.9622 | pathogenic | -2.343 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
Y/M | 0.985 | likely_pathogenic | 0.9886 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Y/N | 0.9764 | likely_pathogenic | 0.9822 | pathogenic | -3.38 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.661327712 | None | None | N |
Y/P | 0.9992 | likely_pathogenic | 0.9996 | pathogenic | -2.824 | Highly Destabilizing | 1.0 | D | 0.942 | deleterious | None | None | None | None | N |
Y/Q | 0.9982 | likely_pathogenic | 0.9988 | pathogenic | -3.104 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/R | 0.9934 | likely_pathogenic | 0.996 | pathogenic | -2.383 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/S | 0.9874 | likely_pathogenic | 0.9898 | pathogenic | -3.681 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.661327712 | None | None | N |
Y/T | 0.9945 | likely_pathogenic | 0.9956 | pathogenic | -3.34 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/V | 0.9539 | likely_pathogenic | 0.9625 | pathogenic | -2.824 | Highly Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
Y/W | 0.8825 | likely_pathogenic | 0.9017 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.