Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25255 | 75988;75989;75990 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
N2AB | 23614 | 71065;71066;71067 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
N2A | 22687 | 68284;68285;68286 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
N2B | 16190 | 48793;48794;48795 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
Novex-1 | 16315 | 49168;49169;49170 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
Novex-2 | 16382 | 49369;49370;49371 | chr2:178570369;178570368;178570367 | chr2:179435096;179435095;179435094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1226764220 | -1.462 | 0.892 | N | 0.485 | 0.291 | 0.589010861393 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
V/A | rs1226764220 | -1.462 | 0.892 | N | 0.485 | 0.291 | 0.589010861393 | gnomAD-4.0.0 | 3.18492E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2048 | likely_benign | 0.237 | benign | -1.335 | Destabilizing | 0.892 | D | 0.485 | neutral | N | 0.475078541 | None | None | I |
V/C | 0.7672 | likely_pathogenic | 0.8116 | pathogenic | -0.946 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | I |
V/D | 0.9215 | likely_pathogenic | 0.9674 | pathogenic | -1.086 | Destabilizing | 0.994 | D | 0.818 | deleterious | D | 0.525049666 | None | None | I |
V/E | 0.8414 | likely_pathogenic | 0.9231 | pathogenic | -1.101 | Destabilizing | 0.987 | D | 0.784 | deleterious | None | None | None | None | I |
V/F | 0.4019 | ambiguous | 0.5524 | ambiguous | -1.075 | Destabilizing | 0.935 | D | 0.723 | prob.delet. | N | 0.497168814 | None | None | I |
V/G | 0.5543 | ambiguous | 0.6429 | pathogenic | -1.635 | Destabilizing | 0.983 | D | 0.781 | deleterious | D | 0.525303156 | None | None | I |
V/H | 0.9104 | likely_pathogenic | 0.9585 | pathogenic | -1.176 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | I |
V/I | 0.1034 | likely_benign | 0.134 | benign | -0.626 | Destabilizing | 0.773 | D | 0.496 | neutral | N | 0.476368761 | None | None | I |
V/K | 0.9111 | likely_pathogenic | 0.9607 | pathogenic | -1.166 | Destabilizing | 0.987 | D | 0.795 | deleterious | None | None | None | None | I |
V/L | 0.4336 | ambiguous | 0.6128 | pathogenic | -0.626 | Destabilizing | 0.63 | D | 0.497 | neutral | N | 0.471747178 | None | None | I |
V/M | 0.2484 | likely_benign | 0.3722 | ambiguous | -0.494 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/N | 0.7864 | likely_pathogenic | 0.8846 | pathogenic | -0.962 | Destabilizing | 0.987 | D | 0.82 | deleterious | None | None | None | None | I |
V/P | 0.9467 | likely_pathogenic | 0.969 | pathogenic | -0.827 | Destabilizing | 0.996 | D | 0.813 | deleterious | None | None | None | None | I |
V/Q | 0.794 | likely_pathogenic | 0.8869 | pathogenic | -1.131 | Destabilizing | 0.987 | D | 0.818 | deleterious | None | None | None | None | I |
V/R | 0.8768 | likely_pathogenic | 0.9356 | pathogenic | -0.648 | Destabilizing | 0.987 | D | 0.814 | deleterious | None | None | None | None | I |
V/S | 0.4398 | ambiguous | 0.523 | ambiguous | -1.462 | Destabilizing | 0.987 | D | 0.782 | deleterious | None | None | None | None | I |
V/T | 0.2477 | likely_benign | 0.3068 | benign | -1.364 | Destabilizing | 0.957 | D | 0.545 | neutral | None | None | None | None | I |
V/W | 0.9565 | likely_pathogenic | 0.9804 | pathogenic | -1.251 | Destabilizing | 0.997 | D | 0.793 | deleterious | None | None | None | None | I |
V/Y | 0.8652 | likely_pathogenic | 0.9287 | pathogenic | -0.953 | Destabilizing | 0.073 | N | 0.302 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.