Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25257 | 75994;75995;75996 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
N2AB | 23616 | 71071;71072;71073 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
N2A | 22689 | 68290;68291;68292 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
N2B | 16192 | 48799;48800;48801 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
Novex-1 | 16317 | 49174;49175;49176 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
Novex-2 | 16384 | 49375;49376;49377 | chr2:178570363;178570362;178570361 | chr2:179435090;179435089;179435088 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.042 | N | 0.28 | 0.102 | 0.224531998449 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3055 | likely_benign | 0.3767 | ambiguous | -0.849 | Destabilizing | 0.667 | D | 0.363 | neutral | None | None | None | None | N |
A/D | 0.2529 | likely_benign | 0.2782 | benign | -1.047 | Destabilizing | 0.175 | N | 0.368 | neutral | N | 0.434364269 | None | None | N |
A/E | 0.2394 | likely_benign | 0.2555 | benign | -1.163 | Destabilizing | 0.055 | N | 0.349 | neutral | None | None | None | None | N |
A/F | 0.345 | ambiguous | 0.3834 | ambiguous | -1.148 | Destabilizing | 0.497 | N | 0.381 | neutral | None | None | None | None | N |
A/G | 0.0964 | likely_benign | 0.1026 | benign | -0.879 | Destabilizing | 0.042 | N | 0.28 | neutral | N | 0.415394506 | None | None | N |
A/H | 0.4032 | ambiguous | 0.4341 | ambiguous | -0.946 | Destabilizing | 0.667 | D | 0.337 | neutral | None | None | None | None | N |
A/I | 0.2152 | likely_benign | 0.2413 | benign | -0.522 | Destabilizing | 0.046 | N | 0.347 | neutral | None | None | None | None | N |
A/K | 0.3603 | ambiguous | 0.4039 | ambiguous | -1.082 | Destabilizing | 0.124 | N | 0.358 | neutral | None | None | None | None | N |
A/L | 0.1555 | likely_benign | 0.1743 | benign | -0.522 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | N |
A/M | 0.1887 | likely_benign | 0.2108 | benign | -0.335 | Destabilizing | 0.497 | N | 0.343 | neutral | None | None | None | None | N |
A/N | 0.1625 | likely_benign | 0.1788 | benign | -0.734 | Destabilizing | 0.124 | N | 0.408 | neutral | None | None | None | None | N |
A/P | 0.1426 | likely_benign | 0.1484 | benign | -0.554 | Destabilizing | 0.001 | N | 0.204 | neutral | N | 0.42849709 | None | None | N |
A/Q | 0.2822 | likely_benign | 0.3024 | benign | -1.024 | Destabilizing | 0.011 | N | 0.207 | neutral | None | None | None | None | N |
A/R | 0.3624 | ambiguous | 0.4021 | ambiguous | -0.563 | Destabilizing | 0.22 | N | 0.375 | neutral | None | None | None | None | N |
A/S | 0.0743 | likely_benign | 0.0772 | benign | -0.986 | Destabilizing | None | N | 0.065 | neutral | N | 0.38713047 | None | None | N |
A/T | 0.0716 | likely_benign | 0.0741 | benign | -1.025 | Destabilizing | 0.042 | N | 0.254 | neutral | N | 0.430515887 | None | None | N |
A/V | 0.1191 | likely_benign | 0.1289 | benign | -0.554 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.469105987 | None | None | N |
A/W | 0.6851 | likely_pathogenic | 0.7244 | pathogenic | -1.345 | Destabilizing | 0.958 | D | 0.428 | neutral | None | None | None | None | N |
A/Y | 0.393 | ambiguous | 0.4368 | ambiguous | -0.999 | Destabilizing | 0.667 | D | 0.37 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.