Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25260 | 76003;76004;76005 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
N2AB | 23619 | 71080;71081;71082 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
N2A | 22692 | 68299;68300;68301 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
N2B | 16195 | 48808;48809;48810 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
Novex-1 | 16320 | 49183;49184;49185 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
Novex-2 | 16387 | 49384;49385;49386 | chr2:178570354;178570353;178570352 | chr2:179435081;179435080;179435079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1707726034 | None | 0.99 | N | 0.564 | 0.312 | 0.214338557667 | gnomAD-4.0.0 | 8.21322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89547E-06 | 0 | 1.65728E-05 |
Q/R | None | None | 0.904 | N | 0.523 | 0.275 | 0.201204373187 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.166 | likely_benign | 0.2053 | benign | -0.27 | Destabilizing | 0.86 | D | 0.547 | neutral | None | None | None | None | N |
Q/C | 0.5735 | likely_pathogenic | 0.6719 | pathogenic | 0.217 | Stabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
Q/D | 0.3771 | ambiguous | 0.4226 | ambiguous | -0.037 | Destabilizing | 0.974 | D | 0.509 | neutral | None | None | None | None | N |
Q/E | 0.096 | likely_benign | 0.1012 | benign | -0.057 | Destabilizing | 0.795 | D | 0.455 | neutral | N | 0.425512713 | None | None | N |
Q/F | 0.6803 | likely_pathogenic | 0.7498 | pathogenic | -0.396 | Destabilizing | 0.956 | D | 0.575 | neutral | None | None | None | None | N |
Q/G | 0.2428 | likely_benign | 0.2763 | benign | -0.484 | Destabilizing | 0.926 | D | 0.481 | neutral | None | None | None | None | N |
Q/H | 0.2184 | likely_benign | 0.2464 | benign | -0.426 | Destabilizing | 0.99 | D | 0.564 | neutral | N | 0.483040864 | None | None | N |
Q/I | 0.3407 | ambiguous | 0.4235 | ambiguous | 0.209 | Stabilizing | 0.915 | D | 0.485 | neutral | None | None | None | None | N |
Q/K | 0.0827 | likely_benign | 0.0865 | benign | -0.018 | Destabilizing | 0.904 | D | 0.521 | neutral | N | 0.402502567 | None | None | N |
Q/L | 0.1308 | likely_benign | 0.1651 | benign | 0.209 | Stabilizing | 0.014 | N | 0.284 | neutral | N | 0.502320058 | None | None | N |
Q/M | 0.2908 | likely_benign | 0.3608 | ambiguous | 0.517 | Stabilizing | 0.956 | D | 0.567 | neutral | None | None | None | None | N |
Q/N | 0.2533 | likely_benign | 0.288 | benign | -0.323 | Destabilizing | 0.993 | D | 0.529 | neutral | None | None | None | None | N |
Q/P | 0.0936 | likely_benign | 0.1126 | benign | 0.079 | Stabilizing | 0.99 | D | 0.576 | neutral | N | 0.436921785 | None | None | N |
Q/R | 0.1051 | likely_benign | 0.1091 | benign | 0.119 | Stabilizing | 0.904 | D | 0.523 | neutral | N | 0.437788576 | None | None | N |
Q/S | 0.1994 | likely_benign | 0.236 | benign | -0.325 | Destabilizing | 0.926 | D | 0.497 | neutral | None | None | None | None | N |
Q/T | 0.1528 | likely_benign | 0.1891 | benign | -0.185 | Destabilizing | 0.86 | D | 0.529 | neutral | None | None | None | None | N |
Q/V | 0.2 | likely_benign | 0.2668 | benign | 0.079 | Stabilizing | 0.754 | D | 0.494 | neutral | None | None | None | None | N |
Q/W | 0.6371 | likely_pathogenic | 0.6795 | pathogenic | -0.358 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
Q/Y | 0.4963 | ambiguous | 0.5518 | ambiguous | -0.118 | Destabilizing | 0.978 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.