Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25268 | 76027;76028;76029 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
N2AB | 23627 | 71104;71105;71106 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
N2A | 22700 | 68323;68324;68325 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
N2B | 16203 | 48832;48833;48834 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
Novex-1 | 16328 | 49207;49208;49209 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
Novex-2 | 16395 | 49408;49409;49410 | chr2:178570330;178570329;178570328 | chr2:179435057;179435056;179435055 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1324895308 | 0.318 | 0.967 | N | 0.648 | 0.252 | 0.180583059064 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1324895308 | 0.318 | 0.967 | N | 0.648 | 0.252 | 0.180583059064 | gnomAD-4.0.0 | 1.59236E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8318 | likely_pathogenic | 0.8868 | pathogenic | 0.081 | Stabilizing | 0.916 | D | 0.553 | neutral | None | None | None | None | N |
K/C | 0.8965 | likely_pathogenic | 0.9373 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/D | 0.9056 | likely_pathogenic | 0.9285 | pathogenic | -0.11 | Destabilizing | 0.987 | D | 0.627 | neutral | None | None | None | None | N |
K/E | 0.8071 | likely_pathogenic | 0.8629 | pathogenic | -0.111 | Destabilizing | 0.892 | D | 0.541 | neutral | N | 0.502757201 | None | None | N |
K/F | 0.9779 | likely_pathogenic | 0.9872 | pathogenic | -0.163 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/G | 0.7016 | likely_pathogenic | 0.774 | pathogenic | -0.086 | Destabilizing | 0.975 | D | 0.562 | neutral | None | None | None | None | N |
K/H | 0.4825 | ambiguous | 0.5738 | pathogenic | -0.202 | Destabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | N |
K/I | 0.951 | likely_pathogenic | 0.9692 | pathogenic | 0.44 | Stabilizing | 0.987 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/L | 0.8622 | likely_pathogenic | 0.906 | pathogenic | 0.44 | Stabilizing | 0.975 | D | 0.562 | neutral | None | None | None | None | N |
K/M | 0.8265 | likely_pathogenic | 0.8801 | pathogenic | 0.074 | Stabilizing | 0.999 | D | 0.604 | neutral | N | 0.514321563 | None | None | N |
K/N | 0.8077 | likely_pathogenic | 0.8539 | pathogenic | 0.16 | Stabilizing | 0.967 | D | 0.648 | neutral | N | 0.461561152 | None | None | N |
K/P | 0.9534 | likely_pathogenic | 0.9738 | pathogenic | 0.346 | Stabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | N |
K/Q | 0.4471 | ambiguous | 0.55 | ambiguous | 0.01 | Stabilizing | 0.967 | D | 0.659 | neutral | N | 0.49494986 | None | None | N |
K/R | 0.0871 | likely_benign | 0.0992 | benign | 0.001 | Stabilizing | 0.025 | N | 0.18 | neutral | N | 0.469164702 | None | None | N |
K/S | 0.8239 | likely_pathogenic | 0.8782 | pathogenic | -0.251 | Destabilizing | 0.916 | D | 0.607 | neutral | None | None | None | None | N |
K/T | 0.7665 | likely_pathogenic | 0.8445 | pathogenic | -0.12 | Destabilizing | 0.967 | D | 0.611 | neutral | N | 0.479074105 | None | None | N |
K/V | 0.8976 | likely_pathogenic | 0.9339 | pathogenic | 0.346 | Stabilizing | 0.987 | D | 0.628 | neutral | None | None | None | None | N |
K/W | 0.9436 | likely_pathogenic | 0.9684 | pathogenic | -0.236 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.9079 | likely_pathogenic | 0.9354 | pathogenic | 0.118 | Stabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.