Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25271 | 76036;76037;76038 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
N2AB | 23630 | 71113;71114;71115 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
N2A | 22703 | 68332;68333;68334 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
N2B | 16206 | 48841;48842;48843 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
Novex-1 | 16331 | 49216;49217;49218 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
Novex-2 | 16398 | 49417;49418;49419 | chr2:178570321;178570320;178570319 | chr2:179435048;179435047;179435046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1163400034 | -0.789 | 0.324 | N | 0.453 | 0.325 | 0.372087925617 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
E/G | rs1163400034 | -0.789 | 0.324 | N | 0.453 | 0.325 | 0.372087925617 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1163400034 | -0.789 | 0.324 | N | 0.453 | 0.325 | 0.372087925617 | gnomAD-4.0.0 | 1.02553E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.91524E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1133 | likely_benign | 0.1299 | benign | -0.456 | Destabilizing | 0.09 | N | 0.398 | neutral | N | 0.474920026 | None | None | N |
E/C | 0.8204 | likely_pathogenic | 0.8634 | pathogenic | 0.092 | Stabilizing | 0.981 | D | 0.533 | neutral | None | None | None | None | N |
E/D | 0.258 | likely_benign | 0.3099 | benign | -0.459 | Destabilizing | 0.165 | N | 0.464 | neutral | N | 0.470180697 | None | None | N |
E/F | 0.8398 | likely_pathogenic | 0.8755 | pathogenic | -0.505 | Destabilizing | 0.932 | D | 0.485 | neutral | None | None | None | None | N |
E/G | 0.2438 | likely_benign | 0.2581 | benign | -0.676 | Destabilizing | 0.324 | N | 0.453 | neutral | N | 0.491830124 | None | None | N |
E/H | 0.5264 | ambiguous | 0.5933 | pathogenic | -0.574 | Destabilizing | 0.818 | D | 0.386 | neutral | None | None | None | None | N |
E/I | 0.3724 | ambiguous | 0.4377 | ambiguous | 0.096 | Stabilizing | 0.818 | D | 0.492 | neutral | None | None | None | None | N |
E/K | 0.1683 | likely_benign | 0.1842 | benign | 0.14 | Stabilizing | 0.001 | N | 0.19 | neutral | N | 0.447293494 | None | None | N |
E/L | 0.4163 | ambiguous | 0.4774 | ambiguous | 0.096 | Stabilizing | 0.388 | N | 0.501 | neutral | None | None | None | None | N |
E/M | 0.4742 | ambiguous | 0.542 | ambiguous | 0.418 | Stabilizing | 0.981 | D | 0.443 | neutral | None | None | None | None | N |
E/N | 0.4278 | ambiguous | 0.4877 | ambiguous | -0.049 | Destabilizing | 0.69 | D | 0.418 | neutral | None | None | None | None | N |
E/P | 0.2732 | likely_benign | 0.3066 | benign | -0.067 | Destabilizing | 0.001 | N | 0.171 | neutral | None | None | None | None | N |
E/Q | 0.1286 | likely_benign | 0.1421 | benign | -0.025 | Destabilizing | 0.193 | N | 0.506 | neutral | N | 0.480597991 | None | None | N |
E/R | 0.2655 | likely_benign | 0.2957 | benign | 0.229 | Stabilizing | 0.241 | N | 0.45 | neutral | None | None | None | None | N |
E/S | 0.2347 | likely_benign | 0.2754 | benign | -0.252 | Destabilizing | 0.241 | N | 0.417 | neutral | None | None | None | None | N |
E/T | 0.252 | likely_benign | 0.2944 | benign | -0.082 | Destabilizing | 0.388 | N | 0.466 | neutral | None | None | None | None | N |
E/V | 0.2027 | likely_benign | 0.2368 | benign | -0.067 | Destabilizing | 0.324 | N | 0.467 | neutral | N | 0.46869944 | None | None | N |
E/W | 0.9393 | likely_pathogenic | 0.9574 | pathogenic | -0.415 | Destabilizing | 0.981 | D | 0.581 | neutral | None | None | None | None | N |
E/Y | 0.724 | likely_pathogenic | 0.7777 | pathogenic | -0.283 | Destabilizing | 0.932 | D | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.