Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25285 | 76078;76079;76080 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
N2AB | 23644 | 71155;71156;71157 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
N2A | 22717 | 68374;68375;68376 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
N2B | 16220 | 48883;48884;48885 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
Novex-1 | 16345 | 49258;49259;49260 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
Novex-2 | 16412 | 49459;49460;49461 | chr2:178570279;178570278;178570277 | chr2:179435006;179435005;179435004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | N | 0.697 | 0.33 | 0.460264052551 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9123 | likely_pathogenic | 0.9081 | pathogenic | -0.841 | Destabilizing | 0.916 | D | 0.648 | neutral | None | None | None | None | I |
Y/C | 0.4944 | ambiguous | 0.4923 | ambiguous | 0.043 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.468393043 | None | None | I |
Y/D | 0.885 | likely_pathogenic | 0.8699 | pathogenic | 0.878 | Stabilizing | 0.994 | D | 0.689 | prob.neutral | N | 0.500749985 | None | None | I |
Y/E | 0.966 | likely_pathogenic | 0.9588 | pathogenic | 0.866 | Stabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | I |
Y/F | 0.1104 | likely_benign | 0.107 | benign | -0.43 | Destabilizing | 0.892 | D | 0.538 | neutral | N | 0.477229612 | None | None | I |
Y/G | 0.9129 | likely_pathogenic | 0.9125 | pathogenic | -1.042 | Destabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
Y/H | 0.532 | ambiguous | 0.4743 | ambiguous | 0.118 | Stabilizing | 0.994 | D | 0.604 | neutral | N | 0.474367298 | None | None | I |
Y/I | 0.7554 | likely_pathogenic | 0.7429 | pathogenic | -0.327 | Destabilizing | 0.073 | N | 0.478 | neutral | None | None | None | None | I |
Y/K | 0.9561 | likely_pathogenic | 0.9518 | pathogenic | 0.133 | Stabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
Y/L | 0.8056 | likely_pathogenic | 0.798 | pathogenic | -0.327 | Destabilizing | 0.437 | N | 0.595 | neutral | None | None | None | None | I |
Y/M | 0.8392 | likely_pathogenic | 0.8211 | pathogenic | -0.144 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | I |
Y/N | 0.6204 | likely_pathogenic | 0.5779 | pathogenic | -0.04 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | N | 0.470555409 | None | None | I |
Y/P | 0.9923 | likely_pathogenic | 0.9937 | pathogenic | -0.48 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9228 | likely_pathogenic | 0.9079 | pathogenic | -0.009 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | I |
Y/R | 0.8984 | likely_pathogenic | 0.8971 | pathogenic | 0.431 | Stabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | I |
Y/S | 0.8023 | likely_pathogenic | 0.7772 | pathogenic | -0.515 | Destabilizing | 0.983 | D | 0.662 | neutral | N | 0.469670037 | None | None | I |
Y/T | 0.907 | likely_pathogenic | 0.9034 | pathogenic | -0.434 | Destabilizing | 0.975 | D | 0.647 | neutral | None | None | None | None | I |
Y/V | 0.6796 | likely_pathogenic | 0.6761 | pathogenic | -0.48 | Destabilizing | 0.653 | D | 0.587 | neutral | None | None | None | None | I |
Y/W | 0.5881 | likely_pathogenic | 0.5706 | pathogenic | -0.491 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.