Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25287 | 76084;76085;76086 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
N2AB | 23646 | 71161;71162;71163 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
N2A | 22719 | 68380;68381;68382 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
N2B | 16222 | 48889;48890;48891 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
Novex-1 | 16347 | 49264;49265;49266 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
Novex-2 | 16414 | 49465;49466;49467 | chr2:178570273;178570272;178570271 | chr2:179435000;179434999;179434998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.016 | N | 0.267 | 0.033 | 0.28722502521 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1324 | likely_benign | 0.1436 | benign | -1.189 | Destabilizing | 0.201 | N | 0.519 | neutral | N | 0.480019201 | None | None | I |
V/C | 0.6525 | likely_pathogenic | 0.708 | pathogenic | -0.939 | Destabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | I |
V/D | 0.4761 | ambiguous | 0.4704 | ambiguous | -0.728 | Destabilizing | 0.009 | N | 0.526 | neutral | N | 0.503088062 | None | None | I |
V/E | 0.3451 | ambiguous | 0.3417 | ambiguous | -0.783 | Destabilizing | 0.447 | N | 0.654 | neutral | None | None | None | None | I |
V/F | 0.1961 | likely_benign | 0.213 | benign | -1.059 | Destabilizing | 0.81 | D | 0.605 | neutral | N | 0.480990343 | None | None | I |
V/G | 0.2757 | likely_benign | 0.2835 | benign | -1.432 | Destabilizing | 0.549 | D | 0.657 | neutral | D | 0.522596542 | None | None | I |
V/H | 0.6062 | likely_pathogenic | 0.6394 | pathogenic | -0.831 | Destabilizing | 0.992 | D | 0.665 | neutral | None | None | None | None | I |
V/I | 0.0692 | likely_benign | 0.0719 | benign | -0.655 | Destabilizing | 0.016 | N | 0.267 | neutral | N | 0.431977325 | None | None | I |
V/K | 0.3564 | ambiguous | 0.3829 | ambiguous | -0.876 | Destabilizing | 0.85 | D | 0.66 | neutral | None | None | None | None | I |
V/L | 0.2111 | likely_benign | 0.2379 | benign | -0.655 | Destabilizing | 0.08 | N | 0.492 | neutral | N | 0.486675815 | None | None | I |
V/M | 0.15 | likely_benign | 0.1631 | benign | -0.559 | Destabilizing | 0.103 | N | 0.479 | neutral | None | None | None | None | I |
V/N | 0.3457 | ambiguous | 0.3735 | ambiguous | -0.631 | Destabilizing | 0.739 | D | 0.672 | neutral | None | None | None | None | I |
V/P | 0.3384 | likely_benign | 0.3895 | ambiguous | -0.797 | Destabilizing | 0.92 | D | 0.67 | neutral | None | None | None | None | I |
V/Q | 0.343 | ambiguous | 0.364 | ambiguous | -0.871 | Destabilizing | 0.92 | D | 0.671 | neutral | None | None | None | None | I |
V/R | 0.3034 | likely_benign | 0.3261 | benign | -0.297 | Destabilizing | 0.85 | D | 0.677 | prob.neutral | None | None | None | None | I |
V/S | 0.218 | likely_benign | 0.2314 | benign | -1.149 | Destabilizing | 0.447 | N | 0.635 | neutral | None | None | None | None | I |
V/T | 0.1297 | likely_benign | 0.1399 | benign | -1.094 | Destabilizing | 0.005 | N | 0.23 | neutral | None | None | None | None | I |
V/W | 0.798 | likely_pathogenic | 0.8238 | pathogenic | -1.118 | Destabilizing | 0.992 | D | 0.706 | prob.neutral | None | None | None | None | I |
V/Y | 0.5501 | ambiguous | 0.5983 | pathogenic | -0.846 | Destabilizing | 0.92 | D | 0.593 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.