Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25289 | 76090;76091;76092 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
N2AB | 23648 | 71167;71168;71169 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
N2A | 22721 | 68386;68387;68388 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
N2B | 16224 | 48895;48896;48897 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
Novex-1 | 16349 | 49270;49271;49272 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
Novex-2 | 16416 | 49471;49472;49473 | chr2:178570267;178570266;178570265 | chr2:179434994;179434993;179434992 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.988 | N | 0.675 | 0.352 | 0.367425347029 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3258 | likely_benign | 0.285 | benign | -0.513 | Destabilizing | 0.958 | D | 0.652 | neutral | N | 0.478775071 | None | None | I |
E/C | 0.9181 | likely_pathogenic | 0.9124 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
E/D | 0.1855 | likely_benign | 0.1535 | benign | -0.526 | Destabilizing | 0.979 | D | 0.557 | neutral | N | 0.496759522 | None | None | I |
E/F | 0.8548 | likely_pathogenic | 0.8377 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/G | 0.4365 | ambiguous | 0.3806 | ambiguous | -0.729 | Destabilizing | 0.988 | D | 0.675 | prob.neutral | N | 0.490776486 | None | None | I |
E/H | 0.7395 | likely_pathogenic | 0.719 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
E/I | 0.4785 | ambiguous | 0.4443 | ambiguous | 0.03 | Stabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | I |
E/K | 0.3287 | likely_benign | 0.3188 | benign | 0.054 | Stabilizing | 0.958 | D | 0.625 | neutral | N | 0.468166007 | None | None | I |
E/L | 0.5626 | ambiguous | 0.5319 | ambiguous | 0.03 | Stabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/M | 0.5942 | likely_pathogenic | 0.5648 | pathogenic | 0.13 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/N | 0.4408 | ambiguous | 0.3904 | ambiguous | -0.235 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/P | 0.6066 | likely_pathogenic | 0.6084 | pathogenic | -0.131 | Destabilizing | 0.086 | N | 0.471 | neutral | None | None | None | None | I |
E/Q | 0.2644 | likely_benign | 0.2505 | benign | -0.207 | Destabilizing | 0.994 | D | 0.693 | prob.neutral | N | 0.481497322 | None | None | I |
E/R | 0.5249 | ambiguous | 0.5189 | ambiguous | 0.339 | Stabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/S | 0.3964 | ambiguous | 0.3507 | ambiguous | -0.419 | Destabilizing | 0.968 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/T | 0.4662 | ambiguous | 0.425 | ambiguous | -0.251 | Destabilizing | 0.991 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/V | 0.3087 | likely_benign | 0.2822 | benign | -0.131 | Destabilizing | 0.994 | D | 0.704 | prob.neutral | D | 0.524850201 | None | None | I |
E/W | 0.9666 | likely_pathogenic | 0.9629 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/Y | 0.7726 | likely_pathogenic | 0.7594 | pathogenic | -0.115 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.