Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25290 | 76093;76094;76095 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
N2AB | 23649 | 71170;71171;71172 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
N2A | 22722 | 68389;68390;68391 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
N2B | 16225 | 48898;48899;48900 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
Novex-1 | 16350 | 49273;49274;49275 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
Novex-2 | 16417 | 49474;49475;49476 | chr2:178570264;178570263;178570262 | chr2:179434991;179434990;179434989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.806 | 0.466 | 0.630881660512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0998 | likely_benign | 0.0903 | benign | -1.741 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.468682532 | None | None | N |
P/C | 0.5761 | likely_pathogenic | 0.5549 | ambiguous | -0.899 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/D | 0.8838 | likely_pathogenic | 0.8916 | pathogenic | -1.89 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
P/E | 0.7755 | likely_pathogenic | 0.7836 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
P/F | 0.645 | likely_pathogenic | 0.607 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/G | 0.4347 | ambiguous | 0.4516 | ambiguous | -2.058 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
P/H | 0.5213 | ambiguous | 0.4941 | ambiguous | -1.625 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.519769747 | None | None | N |
P/I | 0.6224 | likely_pathogenic | 0.5835 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
P/K | 0.8098 | likely_pathogenic | 0.8197 | pathogenic | -1.499 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/L | 0.4137 | ambiguous | 0.3968 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.510904976 | None | None | N |
P/M | 0.5624 | ambiguous | 0.54 | ambiguous | -0.605 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
P/N | 0.7086 | likely_pathogenic | 0.7185 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
P/Q | 0.5654 | likely_pathogenic | 0.5564 | ambiguous | -1.441 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/R | 0.7107 | likely_pathogenic | 0.7103 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.523528729 | None | None | N |
P/S | 0.2112 | likely_benign | 0.2087 | benign | -1.686 | Destabilizing | 1.0 | D | 0.746 | deleterious | N | 0.504664006 | None | None | N |
P/T | 0.2898 | likely_benign | 0.2756 | benign | -1.591 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.494157074 | None | None | N |
P/V | 0.427 | ambiguous | 0.3936 | ambiguous | -1.182 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
P/W | 0.8123 | likely_pathogenic | 0.7835 | pathogenic | -1.566 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/Y | 0.6411 | likely_pathogenic | 0.6085 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.