Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25291 | 76096;76097;76098 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
N2AB | 23650 | 71173;71174;71175 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
N2A | 22723 | 68392;68393;68394 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
N2B | 16226 | 48901;48902;48903 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
Novex-1 | 16351 | 49276;49277;49278 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
Novex-2 | 16418 | 49477;49478;49479 | chr2:178570261;178570260;178570259 | chr2:179434988;179434987;179434986 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1559388448 | None | 0.994 | D | 0.851 | 0.547 | 0.82834384376 | gnomAD-4.0.0 | 2.05307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69871E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.442 | ambiguous | 0.4489 | ambiguous | -2.275 | Highly Destabilizing | 0.938 | D | 0.615 | neutral | None | None | None | None | N |
L/C | 0.5559 | ambiguous | 0.5924 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/D | 0.9824 | likely_pathogenic | 0.9829 | pathogenic | -2.226 | Highly Destabilizing | 0.991 | D | 0.844 | deleterious | None | None | None | None | N |
L/E | 0.8207 | likely_pathogenic | 0.8327 | pathogenic | -2.094 | Highly Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
L/F | 0.5589 | ambiguous | 0.5861 | pathogenic | -1.367 | Destabilizing | 0.994 | D | 0.745 | deleterious | D | 0.541378809 | None | None | N |
L/G | 0.8562 | likely_pathogenic | 0.8736 | pathogenic | -2.734 | Highly Destabilizing | 0.991 | D | 0.808 | deleterious | None | None | None | None | N |
L/H | 0.7643 | likely_pathogenic | 0.7726 | pathogenic | -2.106 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | D | 0.541885788 | None | None | N |
L/I | 0.1786 | likely_benign | 0.1525 | benign | -1.0 | Destabilizing | 0.958 | D | 0.611 | neutral | N | 0.492800035 | None | None | N |
L/K | 0.668 | likely_pathogenic | 0.7078 | pathogenic | -1.763 | Destabilizing | 0.991 | D | 0.794 | deleterious | None | None | None | None | N |
L/M | 0.2154 | likely_benign | 0.2155 | benign | -0.857 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
L/N | 0.8969 | likely_pathogenic | 0.9024 | pathogenic | -1.807 | Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
L/P | 0.9876 | likely_pathogenic | 0.9898 | pathogenic | -1.401 | Destabilizing | 0.994 | D | 0.851 | deleterious | D | 0.530275993 | None | None | N |
L/Q | 0.4557 | ambiguous | 0.4834 | ambiguous | -1.817 | Destabilizing | 0.995 | D | 0.847 | deleterious | None | None | None | None | N |
L/R | 0.4911 | ambiguous | 0.5415 | ambiguous | -1.317 | Destabilizing | 0.988 | D | 0.821 | deleterious | D | 0.541378809 | None | None | N |
L/S | 0.6925 | likely_pathogenic | 0.6931 | pathogenic | -2.471 | Highly Destabilizing | 0.982 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/T | 0.4503 | ambiguous | 0.4367 | ambiguous | -2.214 | Highly Destabilizing | 0.18 | N | 0.457 | neutral | None | None | None | None | N |
L/V | 0.1444 | likely_benign | 0.1359 | benign | -1.401 | Destabilizing | 0.919 | D | 0.613 | neutral | D | 0.531790108 | None | None | N |
L/W | 0.8185 | likely_pathogenic | 0.833 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/Y | 0.8475 | likely_pathogenic | 0.8664 | pathogenic | -1.396 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.