Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25292 | 76099;76100;76101 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
N2AB | 23651 | 71176;71177;71178 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
N2A | 22724 | 68395;68396;68397 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
N2B | 16227 | 48904;48905;48906 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
Novex-1 | 16352 | 49279;49280;49281 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
Novex-2 | 16419 | 49480;49481;49482 | chr2:178570258;178570257;178570256 | chr2:179434985;179434984;179434983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1707677184 | None | 0.997 | N | 0.659 | 0.127 | 0.530060385853 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02663E-05 |
E/Q | rs1015604651 | None | 0.999 | N | 0.689 | 0.228 | 0.438383285633 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02682E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2016 | likely_benign | 0.2105 | benign | -0.941 | Destabilizing | 0.997 | D | 0.752 | deleterious | N | 0.486933777 | None | None | I |
E/C | 0.8195 | likely_pathogenic | 0.8301 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/D | 0.2264 | likely_benign | 0.2262 | benign | -0.985 | Destabilizing | 0.997 | D | 0.659 | prob.neutral | N | 0.482249743 | None | None | I |
E/F | 0.6736 | likely_pathogenic | 0.6994 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | I |
E/G | 0.3522 | ambiguous | 0.3803 | ambiguous | -1.318 | Destabilizing | 0.999 | D | 0.595 | neutral | N | 0.514939534 | None | None | I |
E/H | 0.5587 | ambiguous | 0.5739 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
E/I | 0.2568 | likely_benign | 0.2615 | benign | 0.097 | Stabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | I |
E/K | 0.3177 | likely_benign | 0.3315 | benign | -0.414 | Destabilizing | 0.997 | D | 0.723 | deleterious | N | 0.491693491 | None | None | I |
E/L | 0.2898 | likely_benign | 0.3042 | benign | 0.097 | Stabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | I |
E/M | 0.4033 | ambiguous | 0.4086 | ambiguous | 0.509 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/N | 0.4231 | ambiguous | 0.4317 | ambiguous | -1.024 | Destabilizing | 0.999 | D | 0.739 | deleterious | None | None | None | None | I |
E/P | 0.6191 | likely_pathogenic | 0.7169 | pathogenic | -0.228 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | I |
E/Q | 0.1788 | likely_benign | 0.1834 | benign | -0.885 | Destabilizing | 0.999 | D | 0.689 | prob.delet. | N | 0.497194744 | None | None | I |
E/R | 0.4604 | ambiguous | 0.4826 | ambiguous | -0.066 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | I |
E/S | 0.3118 | likely_benign | 0.3214 | benign | -1.341 | Destabilizing | 0.998 | D | 0.705 | prob.delet. | None | None | None | None | I |
E/T | 0.2552 | likely_benign | 0.2554 | benign | -1.017 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | I |
E/V | 0.1476 | likely_benign | 0.1498 | benign | -0.228 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.491239418 | None | None | I |
E/W | 0.9074 | likely_pathogenic | 0.9186 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
E/Y | 0.6549 | likely_pathogenic | 0.6785 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.