Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25294 | 76105;76106;76107 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
N2AB | 23653 | 71182;71183;71184 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
N2A | 22726 | 68401;68402;68403 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
N2B | 16229 | 48910;48911;48912 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
Novex-1 | 16354 | 49285;49286;49287 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
Novex-2 | 16421 | 49486;49487;49488 | chr2:178570252;178570251;178570250 | chr2:179434979;179434978;179434977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.682 | N | 0.619 | 0.172 | 0.314716216878 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85928E-06 | 0 | 0 |
E/Q | None | None | 0.682 | N | 0.582 | 0.147 | 0.180583059064 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0849 | likely_benign | 0.0898 | benign | -0.119 | Destabilizing | 0.518 | D | 0.541 | neutral | N | 0.509627245 | None | None | N |
E/C | 0.5798 | likely_pathogenic | 0.6343 | pathogenic | -0.168 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.0738 | likely_benign | 0.0804 | benign | -0.282 | Destabilizing | 0.003 | N | 0.227 | neutral | N | 0.490945484 | None | None | N |
E/F | 0.4892 | ambiguous | 0.5184 | ambiguous | -0.08 | Destabilizing | 0.984 | D | 0.784 | deleterious | None | None | None | None | N |
E/G | 0.0903 | likely_benign | 0.0973 | benign | -0.264 | Destabilizing | 0.682 | D | 0.619 | neutral | N | 0.466226996 | None | None | N |
E/H | 0.2955 | likely_benign | 0.3037 | benign | 0.457 | Stabilizing | 0.953 | D | 0.614 | neutral | None | None | None | None | N |
E/I | 0.1677 | likely_benign | 0.1829 | benign | 0.213 | Stabilizing | 0.953 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.0862 | likely_benign | 0.085 | benign | 0.395 | Stabilizing | 0.007 | N | 0.246 | neutral | N | 0.475417255 | None | None | N |
E/L | 0.1726 | likely_benign | 0.1903 | benign | 0.213 | Stabilizing | 0.909 | D | 0.722 | deleterious | None | None | None | None | N |
E/M | 0.2377 | likely_benign | 0.2578 | benign | 0.043 | Stabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.1394 | likely_benign | 0.1474 | benign | 0.111 | Stabilizing | 0.587 | D | 0.541 | neutral | None | None | None | None | N |
E/P | 0.1967 | likely_benign | 0.2235 | benign | 0.121 | Stabilizing | 0.953 | D | 0.644 | neutral | None | None | None | None | N |
E/Q | 0.0942 | likely_benign | 0.0949 | benign | 0.132 | Stabilizing | 0.682 | D | 0.582 | neutral | N | 0.464074176 | None | None | N |
E/R | 0.16 | likely_benign | 0.1615 | benign | 0.659 | Stabilizing | 0.587 | D | 0.553 | neutral | None | None | None | None | N |
E/S | 0.1043 | likely_benign | 0.112 | benign | -0.038 | Destabilizing | 0.74 | D | 0.481 | neutral | None | None | None | None | N |
E/T | 0.1218 | likely_benign | 0.1293 | benign | 0.086 | Stabilizing | 0.74 | D | 0.605 | neutral | None | None | None | None | N |
E/V | 0.1042 | likely_benign | 0.1145 | benign | 0.121 | Stabilizing | 0.883 | D | 0.704 | prob.delet. | N | 0.492053479 | None | None | N |
E/W | 0.7587 | likely_pathogenic | 0.7823 | pathogenic | 0.007 | Stabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
E/Y | 0.3866 | ambiguous | 0.4093 | ambiguous | 0.153 | Stabilizing | 0.984 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.