Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25299 | 76120;76121;76122 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
N2AB | 23658 | 71197;71198;71199 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
N2A | 22731 | 68416;68417;68418 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
N2B | 16234 | 48925;48926;48927 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
Novex-1 | 16359 | 49300;49301;49302 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
Novex-2 | 16426 | 49501;49502;49503 | chr2:178570237;178570236;178570235 | chr2:179434964;179434963;179434962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs754354789 | 0.202 | 0.651 | N | 0.334 | 0.337 | 0.263140351381 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
K/N | rs754354789 | 0.202 | 0.651 | N | 0.334 | 0.337 | 0.263140351381 | gnomAD-4.0.0 | 9.55222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.59796E-05 | 0 |
K/Q | None | None | 0.651 | N | 0.455 | 0.133 | 0.209622950755 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2907 | likely_benign | 0.3495 | ambiguous | -0.281 | Destabilizing | 0.032 | N | 0.277 | neutral | None | None | None | None | N |
K/C | 0.4029 | ambiguous | 0.5123 | ambiguous | -0.29 | Destabilizing | 0.995 | D | 0.504 | neutral | None | None | None | None | N |
K/D | 0.6799 | likely_pathogenic | 0.7292 | pathogenic | 0.016 | Stabilizing | 0.946 | D | 0.366 | neutral | None | None | None | None | N |
K/E | 0.178 | likely_benign | 0.1985 | benign | 0.073 | Stabilizing | 0.651 | D | 0.377 | neutral | N | 0.468415341 | None | None | N |
K/F | 0.7327 | likely_pathogenic | 0.7906 | pathogenic | -0.195 | Destabilizing | 0.982 | D | 0.537 | neutral | None | None | None | None | N |
K/G | 0.4022 | ambiguous | 0.465 | ambiguous | -0.589 | Destabilizing | 0.553 | D | 0.394 | neutral | None | None | None | None | N |
K/H | 0.2921 | likely_benign | 0.3282 | benign | -1.01 | Destabilizing | 0.946 | D | 0.256 | neutral | None | None | None | None | N |
K/I | 0.2993 | likely_benign | 0.3352 | benign | 0.482 | Stabilizing | 0.946 | D | 0.636 | neutral | None | None | None | None | N |
K/L | 0.3213 | likely_benign | 0.3839 | ambiguous | 0.482 | Stabilizing | 0.712 | D | 0.365 | neutral | None | None | None | None | N |
K/M | 0.2187 | likely_benign | 0.2549 | benign | 0.409 | Stabilizing | 0.976 | D | 0.243 | neutral | N | 0.471769951 | None | None | N |
K/N | 0.4898 | ambiguous | 0.5347 | ambiguous | -0.08 | Destabilizing | 0.651 | D | 0.334 | neutral | N | 0.487165181 | None | None | N |
K/P | 0.9427 | likely_pathogenic | 0.9564 | pathogenic | 0.259 | Stabilizing | 0.946 | D | 0.385 | neutral | None | None | None | None | N |
K/Q | 0.1123 | likely_benign | 0.1227 | benign | -0.241 | Destabilizing | 0.651 | D | 0.455 | neutral | N | 0.48371008 | None | None | N |
K/R | 0.0699 | likely_benign | 0.071 | benign | -0.39 | Destabilizing | 0.002 | N | 0.162 | neutral | N | 0.436281493 | None | None | N |
K/S | 0.3846 | ambiguous | 0.4348 | ambiguous | -0.678 | Destabilizing | 0.553 | D | 0.268 | neutral | None | None | None | None | N |
K/T | 0.1665 | likely_benign | 0.1824 | benign | -0.438 | Destabilizing | 0.651 | D | 0.299 | neutral | N | 0.470855426 | None | None | N |
K/V | 0.2069 | likely_benign | 0.2392 | benign | 0.259 | Stabilizing | 0.712 | D | 0.409 | neutral | None | None | None | None | N |
K/W | 0.7259 | likely_pathogenic | 0.7762 | pathogenic | -0.102 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | N |
K/Y | 0.6358 | likely_pathogenic | 0.6971 | pathogenic | 0.209 | Stabilizing | 0.982 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.