Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25304 | 76135;76136;76137 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
N2AB | 23663 | 71212;71213;71214 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
N2A | 22736 | 68431;68432;68433 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
N2B | 16239 | 48940;48941;48942 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
Novex-1 | 16364 | 49315;49316;49317 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
Novex-2 | 16431 | 49516;49517;49518 | chr2:178570222;178570221;178570220 | chr2:179434949;179434948;179434947 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.335 | N | 0.418 | 0.209 | 0.647137792213 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | I | None | 0 | 2.28781E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1388 | likely_benign | 0.1597 | benign | -0.619 | Destabilizing | 0.006 | N | 0.072 | neutral | N | 0.515590425 | None | None | I |
V/C | 0.6038 | likely_pathogenic | 0.6785 | pathogenic | -0.647 | Destabilizing | 0.991 | D | 0.331 | neutral | None | None | None | None | I |
V/D | 0.5479 | ambiguous | 0.543 | ambiguous | -0.52 | Destabilizing | 0.004 | N | 0.213 | neutral | None | None | None | None | I |
V/E | 0.3456 | ambiguous | 0.3681 | ambiguous | -0.643 | Destabilizing | 0.335 | N | 0.418 | neutral | N | 0.4690117 | None | None | I |
V/F | 0.2182 | likely_benign | 0.2175 | benign | -1.045 | Destabilizing | 0.966 | D | 0.47 | neutral | None | None | None | None | I |
V/G | 0.2632 | likely_benign | 0.2865 | benign | -0.729 | Destabilizing | 0.501 | D | 0.421 | neutral | N | 0.511905708 | None | None | I |
V/H | 0.5116 | ambiguous | 0.5558 | ambiguous | -0.358 | Destabilizing | 0.991 | D | 0.333 | neutral | None | None | None | None | I |
V/I | 0.0725 | likely_benign | 0.0767 | benign | -0.479 | Destabilizing | 0.293 | N | 0.361 | neutral | N | 0.514438419 | None | None | I |
V/K | 0.2014 | likely_benign | 0.2215 | benign | -0.282 | Destabilizing | 0.571 | D | 0.396 | neutral | None | None | None | None | I |
V/L | 0.1465 | likely_benign | 0.18 | benign | -0.479 | Destabilizing | 0.293 | N | 0.387 | neutral | N | 0.504029424 | None | None | I |
V/M | 0.1381 | likely_benign | 0.165 | benign | -0.282 | Destabilizing | 0.966 | D | 0.367 | neutral | None | None | None | None | I |
V/N | 0.3459 | ambiguous | 0.3738 | ambiguous | -0.086 | Destabilizing | 0.7 | D | 0.401 | neutral | None | None | None | None | I |
V/P | 0.1716 | likely_benign | 0.2073 | benign | -0.493 | Destabilizing | 0.905 | D | 0.409 | neutral | None | None | None | None | I |
V/Q | 0.2538 | likely_benign | 0.2901 | benign | -0.421 | Destabilizing | 0.905 | D | 0.415 | neutral | None | None | None | None | I |
V/R | 0.1979 | likely_benign | 0.2128 | benign | 0.227 | Stabilizing | 0.905 | D | 0.454 | neutral | None | None | None | None | I |
V/S | 0.2282 | likely_benign | 0.2549 | benign | -0.438 | Destabilizing | 0.216 | N | 0.357 | neutral | None | None | None | None | I |
V/T | 0.1553 | likely_benign | 0.1717 | benign | -0.47 | Destabilizing | 0.007 | N | 0.057 | neutral | None | None | None | None | I |
V/W | 0.8159 | likely_pathogenic | 0.8321 | pathogenic | -1.078 | Destabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | I |
V/Y | 0.5629 | ambiguous | 0.5868 | pathogenic | -0.73 | Destabilizing | 0.966 | D | 0.451 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.