Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25310 | 76153;76154;76155 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
N2AB | 23669 | 71230;71231;71232 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
N2A | 22742 | 68449;68450;68451 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
N2B | 16245 | 48958;48959;48960 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
Novex-1 | 16370 | 49333;49334;49335 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
Novex-2 | 16437 | 49534;49535;49536 | chr2:178570204;178570203;178570202 | chr2:179434931;179434930;179434929 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1559387965 | None | 0.285 | N | 0.369 | 0.083 | 0.218845423259 | gnomAD-4.0.0 | 1.36868E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2824 | likely_benign | 0.3399 | benign | -0.945 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | N |
A/D | 0.2161 | likely_benign | 0.2303 | benign | -1.889 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.40894575 | None | None | N |
A/E | 0.1686 | likely_benign | 0.1768 | benign | -1.96 | Destabilizing | 0.017 | N | 0.197 | neutral | None | None | None | None | N |
A/F | 0.2133 | likely_benign | 0.2506 | benign | -1.295 | Destabilizing | 0.965 | D | 0.459 | neutral | None | None | None | None | N |
A/G | 0.1241 | likely_benign | 0.1313 | benign | -1.274 | Destabilizing | 0.285 | N | 0.331 | neutral | N | 0.42995574 | None | None | N |
A/H | 0.3218 | likely_benign | 0.3729 | ambiguous | -1.424 | Destabilizing | 0.901 | D | 0.443 | neutral | None | None | None | None | N |
A/I | 0.1143 | likely_benign | 0.1391 | benign | -0.657 | Destabilizing | 0.901 | D | 0.475 | neutral | None | None | None | None | N |
A/K | 0.2803 | likely_benign | 0.3101 | benign | -1.382 | Destabilizing | 0.39 | N | 0.423 | neutral | None | None | None | None | N |
A/L | 0.1019 | likely_benign | 0.1242 | benign | -0.657 | Destabilizing | 0.561 | D | 0.398 | neutral | None | None | None | None | N |
A/M | 0.1161 | likely_benign | 0.1446 | benign | -0.408 | Destabilizing | 0.965 | D | 0.409 | neutral | None | None | None | None | N |
A/N | 0.1617 | likely_benign | 0.1874 | benign | -1.06 | Destabilizing | 0.017 | N | 0.312 | neutral | None | None | None | None | N |
A/P | 0.0936 | likely_benign | 0.1016 | benign | -0.757 | Destabilizing | 0.003 | N | 0.241 | neutral | N | 0.418933457 | None | None | N |
A/Q | 0.2087 | likely_benign | 0.2332 | benign | -1.335 | Destabilizing | 0.047 | N | 0.241 | neutral | None | None | None | None | N |
A/R | 0.2926 | likely_benign | 0.3164 | benign | -0.903 | Destabilizing | 0.561 | D | 0.458 | neutral | None | None | None | None | N |
A/S | 0.0855 | likely_benign | 0.0926 | benign | -1.271 | Destabilizing | 0.285 | N | 0.369 | neutral | N | 0.420472252 | None | None | N |
A/T | 0.071 | likely_benign | 0.0761 | benign | -1.278 | Destabilizing | 0.491 | N | 0.311 | neutral | N | 0.410679333 | None | None | N |
A/V | 0.0764 | likely_benign | 0.0838 | benign | -0.757 | Destabilizing | 0.662 | D | 0.307 | neutral | N | 0.478712479 | None | None | N |
A/W | 0.5847 | likely_pathogenic | 0.6332 | pathogenic | -1.576 | Destabilizing | 0.991 | D | 0.595 | neutral | None | None | None | None | N |
A/Y | 0.2729 | likely_benign | 0.3203 | benign | -1.242 | Destabilizing | 0.965 | D | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.