Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25311 | 76156;76157;76158 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
N2AB | 23670 | 71233;71234;71235 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
N2A | 22743 | 68452;68453;68454 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
N2B | 16246 | 48961;48962;48963 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
Novex-1 | 16371 | 49336;49337;49338 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
Novex-2 | 16438 | 49537;49538;49539 | chr2:178570201;178570200;178570199 | chr2:179434928;179434927;179434926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1479197659 | -0.303 | 0.956 | N | 0.748 | 0.383 | 0.368369118721 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
P/S | None | None | 0.997 | D | 0.776 | 0.4 | 0.393927044628 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3881 | ambiguous | 0.4001 | ambiguous | -1.99 | Destabilizing | 0.948 | D | 0.679 | prob.neutral | N | 0.501905755 | None | None | N |
P/C | 0.8669 | likely_pathogenic | 0.8949 | pathogenic | -1.903 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/D | 0.9986 | likely_pathogenic | 0.9976 | pathogenic | -2.821 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
P/E | 0.9921 | likely_pathogenic | 0.9884 | pathogenic | -2.632 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
P/F | 0.9886 | likely_pathogenic | 0.9892 | pathogenic | -1.196 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
P/G | 0.9601 | likely_pathogenic | 0.955 | pathogenic | -2.492 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
P/H | 0.9922 | likely_pathogenic | 0.9899 | pathogenic | -2.24 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/I | 0.5142 | ambiguous | 0.5932 | pathogenic | -0.603 | Destabilizing | 0.967 | D | 0.771 | deleterious | None | None | None | None | N |
P/K | 0.9947 | likely_pathogenic | 0.9933 | pathogenic | -1.605 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
P/L | 0.3415 | ambiguous | 0.3698 | ambiguous | -0.603 | Destabilizing | 0.956 | D | 0.748 | deleterious | N | 0.459248779 | None | None | N |
P/M | 0.814 | likely_pathogenic | 0.8307 | pathogenic | -0.907 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
P/N | 0.9954 | likely_pathogenic | 0.9936 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
P/Q | 0.9822 | likely_pathogenic | 0.977 | pathogenic | -1.819 | Destabilizing | 0.999 | D | 0.756 | deleterious | N | 0.512630177 | None | None | N |
P/R | 0.9874 | likely_pathogenic | 0.9845 | pathogenic | -1.431 | Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.539128223 | None | None | N |
P/S | 0.9363 | likely_pathogenic | 0.9185 | pathogenic | -2.491 | Highly Destabilizing | 0.997 | D | 0.776 | deleterious | D | 0.527353844 | None | None | N |
P/T | 0.7296 | likely_pathogenic | 0.694 | pathogenic | -2.164 | Highly Destabilizing | 0.978 | D | 0.777 | deleterious | N | 0.512123198 | None | None | N |
P/V | 0.2922 | likely_benign | 0.3665 | ambiguous | -1.038 | Destabilizing | 0.246 | N | 0.495 | neutral | None | None | None | None | N |
P/W | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
P/Y | 0.9967 | likely_pathogenic | 0.9963 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.