Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25312 | 76159;76160;76161 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
N2AB | 23671 | 71236;71237;71238 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
N2A | 22744 | 68455;68456;68457 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
N2B | 16247 | 48964;48965;48966 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
Novex-1 | 16372 | 49339;49340;49341 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
Novex-2 | 16439 | 49540;49541;49542 | chr2:178570198;178570197;178570196 | chr2:179434925;179434924;179434923 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs770655678 | 0.368 | 0.999 | N | 0.628 | 0.39 | 0.287603790349 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
E/K | rs770655678 | 0.368 | 0.999 | N | 0.628 | 0.39 | 0.287603790349 | gnomAD-4.0.0 | 2.05303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69874E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.157 | likely_benign | 0.176 | benign | -0.343 | Destabilizing | 0.999 | D | 0.757 | deleterious | N | 0.477040324 | None | None | N |
E/C | 0.7529 | likely_pathogenic | 0.8224 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/D | 0.1706 | likely_benign | 0.1952 | benign | -0.443 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.485358436 | None | None | N |
E/F | 0.6905 | likely_pathogenic | 0.7479 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
E/G | 0.2938 | likely_benign | 0.3051 | benign | -0.569 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.487511257 | None | None | N |
E/H | 0.4054 | ambiguous | 0.4575 | ambiguous | 0.043 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/I | 0.2167 | likely_benign | 0.2626 | benign | 0.226 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
E/K | 0.1572 | likely_benign | 0.1614 | benign | 0.25 | Stabilizing | 0.999 | D | 0.628 | neutral | N | 0.501989197 | None | None | N |
E/L | 0.3109 | likely_benign | 0.377 | ambiguous | 0.226 | Stabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
E/M | 0.3469 | ambiguous | 0.4077 | ambiguous | 0.253 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/N | 0.2661 | likely_benign | 0.3068 | benign | -0.125 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/P | 0.9535 | likely_pathogenic | 0.9531 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/Q | 0.1259 | likely_benign | 0.1397 | benign | -0.07 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.497911529 | None | None | N |
E/R | 0.2626 | likely_benign | 0.2792 | benign | 0.482 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/S | 0.1979 | likely_benign | 0.2251 | benign | -0.281 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/T | 0.1633 | likely_benign | 0.1904 | benign | -0.097 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
E/V | 0.1321 | likely_benign | 0.1574 | benign | 0.057 | Stabilizing | 1.0 | D | 0.837 | deleterious | N | 0.511880903 | None | None | N |
E/W | 0.8909 | likely_pathogenic | 0.9132 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/Y | 0.5883 | likely_pathogenic | 0.659 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.