Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25313 | 76162;76163;76164 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
N2AB | 23672 | 71239;71240;71241 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
N2A | 22745 | 68458;68459;68460 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
N2B | 16248 | 48967;48968;48969 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
Novex-1 | 16373 | 49342;49343;49344 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
Novex-2 | 16440 | 49543;49544;49545 | chr2:178570195;178570194;178570193 | chr2:179434922;179434921;179434920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.638 | N | 0.788 | 0.231 | 0.619865016221 | gnomAD-4.0.0 | 1.36867E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79915E-06 | 0 | 0 |
V/I | None | None | 0.002 | N | 0.223 | 0.079 | 0.31291088546 | gnomAD-4.0.0 | 6.84335E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99577E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4126 | ambiguous | 0.4247 | ambiguous | -1.8 | Destabilizing | 0.334 | N | 0.514 | neutral | N | 0.496220805 | None | None | N |
V/C | 0.7927 | likely_pathogenic | 0.822 | pathogenic | -1.3 | Destabilizing | 0.982 | D | 0.762 | deleterious | None | None | None | None | N |
V/D | 0.9371 | likely_pathogenic | 0.9253 | pathogenic | -1.768 | Destabilizing | 0.781 | D | 0.813 | deleterious | N | 0.519714657 | None | None | N |
V/E | 0.8938 | likely_pathogenic | 0.8811 | pathogenic | -1.673 | Destabilizing | 0.826 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.4217 | ambiguous | 0.4443 | ambiguous | -1.215 | Destabilizing | 0.638 | D | 0.788 | deleterious | N | 0.495806597 | None | None | N |
V/G | 0.6313 | likely_pathogenic | 0.6294 | pathogenic | -2.233 | Highly Destabilizing | 0.781 | D | 0.793 | deleterious | D | 0.53384244 | None | None | N |
V/H | 0.9547 | likely_pathogenic | 0.9582 | pathogenic | -1.889 | Destabilizing | 0.982 | D | 0.818 | deleterious | None | None | None | None | N |
V/I | 0.0656 | likely_benign | 0.0707 | benign | -0.662 | Destabilizing | 0.002 | N | 0.223 | neutral | N | 0.485563881 | None | None | N |
V/K | 0.9149 | likely_pathogenic | 0.9111 | pathogenic | -1.519 | Destabilizing | 0.826 | D | 0.801 | deleterious | None | None | None | None | N |
V/L | 0.3189 | likely_benign | 0.3488 | ambiguous | -0.662 | Destabilizing | 0.034 | N | 0.399 | neutral | N | 0.474841959 | None | None | N |
V/M | 0.2813 | likely_benign | 0.3205 | benign | -0.564 | Destabilizing | 0.7 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/N | 0.7882 | likely_pathogenic | 0.8016 | pathogenic | -1.457 | Destabilizing | 0.935 | D | 0.827 | deleterious | None | None | None | None | N |
V/P | 0.7037 | likely_pathogenic | 0.7257 | pathogenic | -1.009 | Destabilizing | 0.935 | D | 0.812 | deleterious | None | None | None | None | N |
V/Q | 0.8977 | likely_pathogenic | 0.8982 | pathogenic | -1.482 | Destabilizing | 0.935 | D | 0.822 | deleterious | None | None | None | None | N |
V/R | 0.8866 | likely_pathogenic | 0.8844 | pathogenic | -1.172 | Destabilizing | 0.826 | D | 0.826 | deleterious | None | None | None | None | N |
V/S | 0.6639 | likely_pathogenic | 0.6926 | pathogenic | -2.065 | Highly Destabilizing | 0.826 | D | 0.779 | deleterious | None | None | None | None | N |
V/T | 0.5494 | ambiguous | 0.5809 | pathogenic | -1.84 | Destabilizing | 0.399 | N | 0.619 | neutral | None | None | None | None | N |
V/W | 0.9607 | likely_pathogenic | 0.9639 | pathogenic | -1.543 | Destabilizing | 0.982 | D | 0.78 | deleterious | None | None | None | None | N |
V/Y | 0.8502 | likely_pathogenic | 0.8579 | pathogenic | -1.209 | Destabilizing | 0.826 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.