Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25317 | 76174;76175;76176 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
N2AB | 23676 | 71251;71252;71253 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
N2A | 22749 | 68470;68471;68472 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
N2B | 16252 | 48979;48980;48981 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
Novex-1 | 16377 | 49354;49355;49356 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
Novex-2 | 16444 | 49555;49556;49557 | chr2:178570183;178570182;178570181 | chr2:179434910;179434909;179434908 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs762723439 | -0.566 | 0.971 | D | 0.473 | 0.446 | 0.565793286963 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1373 | likely_benign | 0.1424 | benign | -0.512 | Destabilizing | 0.014 | N | 0.215 | neutral | N | 0.518119016 | None | None | N |
T/C | 0.5292 | ambiguous | 0.5955 | pathogenic | -0.497 | Destabilizing | 0.994 | D | 0.455 | neutral | None | None | None | None | N |
T/D | 0.682 | likely_pathogenic | 0.7391 | pathogenic | -1.56 | Destabilizing | 0.956 | D | 0.438 | neutral | None | None | None | None | N |
T/E | 0.664 | likely_pathogenic | 0.6761 | pathogenic | -1.532 | Destabilizing | 0.956 | D | 0.436 | neutral | None | None | None | None | N |
T/F | 0.5736 | likely_pathogenic | 0.6041 | pathogenic | -0.717 | Destabilizing | 0.978 | D | 0.571 | neutral | None | None | None | None | N |
T/G | 0.2254 | likely_benign | 0.2466 | benign | -0.781 | Destabilizing | 0.754 | D | 0.443 | neutral | None | None | None | None | N |
T/H | 0.4642 | ambiguous | 0.5331 | ambiguous | -1.264 | Destabilizing | 0.998 | D | 0.533 | neutral | None | None | None | None | N |
T/I | 0.7231 | likely_pathogenic | 0.7513 | pathogenic | 0.118 | Stabilizing | 0.942 | D | 0.474 | neutral | N | 0.508318672 | None | None | N |
T/K | 0.4309 | ambiguous | 0.4562 | ambiguous | -0.775 | Destabilizing | 0.956 | D | 0.442 | neutral | None | None | None | None | N |
T/L | 0.2071 | likely_benign | 0.229 | benign | 0.118 | Stabilizing | 0.754 | D | 0.414 | neutral | None | None | None | None | N |
T/M | 0.1388 | likely_benign | 0.1331 | benign | 0.542 | Stabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | N |
T/N | 0.1812 | likely_benign | 0.2311 | benign | -1.075 | Destabilizing | 0.942 | D | 0.447 | neutral | N | 0.51234505 | None | None | N |
T/P | 0.8366 | likely_pathogenic | 0.8574 | pathogenic | -0.06 | Destabilizing | 0.971 | D | 0.473 | neutral | D | 0.523295828 | None | None | N |
T/Q | 0.3475 | ambiguous | 0.3677 | ambiguous | -1.271 | Destabilizing | 0.956 | D | 0.471 | neutral | None | None | None | None | N |
T/R | 0.3634 | ambiguous | 0.3883 | ambiguous | -0.549 | Destabilizing | 0.956 | D | 0.476 | neutral | None | None | None | None | N |
T/S | 0.1229 | likely_benign | 0.1447 | benign | -1.075 | Destabilizing | 0.058 | N | 0.308 | neutral | N | 0.459222641 | None | None | N |
T/V | 0.4975 | ambiguous | 0.534 | ambiguous | -0.06 | Destabilizing | 0.754 | D | 0.391 | neutral | None | None | None | None | N |
T/W | 0.8839 | likely_pathogenic | 0.9078 | pathogenic | -0.827 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
T/Y | 0.606 | likely_pathogenic | 0.6607 | pathogenic | -0.472 | Destabilizing | 0.993 | D | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.